RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 NCOA5Q9HCD5 579 aaKnown RBP17.87■□□□□ 0.45
CNOT9-205ENST00000433439 LIMCH1Q9UPQ0 1083 aa17.87■□□□□ 0.45
CNOT9-205ENST00000433439 HPS5Q9UPZ3 1129 aa17.87■□□□□ 0.45
CNOT9-205ENST00000433439 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
CNOT9-205ENST00000433439 PALM3A6NDB9 673 aaPredicted RBP17.86■□□□□ 0.45
CNOT9-205ENST00000433439 FOXN1O15353 648 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 PLEKHA8P1O95397 391 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 LARGE1O95461 756 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 CDC27P30260 824 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 SNAP25P60880 206 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 COG2Q14746 738 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 ME3Q16798 604 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 SYDE2Q5VT97 1194 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 NECAB1Q8N987 351 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 ATG4CQ96DT6 458 aa17.86■□□□□ 0.45
CNOT9-205ENST00000433439 ZNF274Q96GC6 653 aaPredicted RBP17.86■□□□□ 0.45
CNOT9-205ENST00000433439 PARK7Q99497 189 aaKnown RBP17.86■□□□□ 0.45
CNOT9-205ENST00000433439 PPFIA3O75145 1194 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 DSG3P32926 999 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 ADD1P35611 737 aaKnown RBP17.85■□□□□ 0.45
CNOT9-205ENST00000433439 SLC4A3P48751 1232 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 EVCP57679 992 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 PRPF38AQ8NAV1 312 aaKnown RBP17.85■□□□□ 0.45
CNOT9-205ENST00000433439 MAP3K14Q99558 947 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 PAGR1Q9BTK6 254 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 RBM28Q9NW13 759 aaKnown RBP17.85■□□□□ 0.45
CNOT9-205ENST00000433439 HOXC10Q9NYD6 342 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 PPP1R9AQ9ULJ8 1098 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 PRR12Q9ULL5 1215 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 SLC45A1Q9Y2W3 748 aa17.85■□□□□ 0.45
CNOT9-205ENST00000433439 SPDYE16A6NNV3 312 aaPredicted RBP17.84■□□□□ 0.45
CNOT9-205ENST00000433439 CPLX1O14810 134 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 PEX10O60683 326 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 DTNBO60941 627 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 TRPA1O75762 1119 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 ALDH1A1P00352 501 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 GNAQP50148 359 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 HERVK_113P62684 666 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 ZFYVE28Q9HCC9 887 aa17.84■□□□□ 0.45
CNOT9-205ENST00000433439 CCDC196A0A1B0GTZ2 297 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 PFKFB2O60825 505 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 TBC1D8O95759 1140 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 RCAN1P53805 252 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 SCRN1Q12765 414 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 CRHR2Q13324 411 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 PLS1Q14651 629 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 CCDC174Q6PII3 467 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 TMTC3Q6ZXV5 915 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 HOMER1Q86YM7 354 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 ADGRF4Q8IZF3 695 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 CPXCR1Q8N123 301 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 SRBD1Q8N5C6 995 aaKnown RBP17.83■□□□□ 0.44
CNOT9-205ENST00000433439 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.44
CNOT9-205ENST00000433439 BEGAINQ9BUH8 593 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 ZCCHC17Q9NP64 241 aaKnown RBP17.83■□□□□ 0.44
CNOT9-205ENST00000433439 FAM217BQ9NTX9 383 aaPredicted RBP17.83■□□□□ 0.44
CNOT9-205ENST00000433439 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 CPA4Q9UI42 421 aa17.83■□□□□ 0.44
CNOT9-205ENST00000433439 ZBED4O75132 1171 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 ECM2O94769 699 aaPredicted RBP17.82■□□□□ 0.44
CNOT9-205ENST00000433439 MCM2P49736 904 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 MAP2K1Q02750 393 aaPredicted RBP17.82■□□□□ 0.44
CNOT9-205ENST00000433439 MLLT1Q03111 559 aaPredicted RBP17.82■□□□□ 0.44
CNOT9-205ENST00000433439 BTNL9Q6UXG8 535 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 CCDC83Q8IWF9 413 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 THSD7BQ9C0I4 1608 aa17.82■□□□□ 0.44
CNOT9-205ENST00000433439 hCG_1642624A0A1W2PR95 340 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 VWA5AO00534 786 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 CA12O43570 354 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 PLA2G6O60733 806 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 PPP2R5BQ15173 497 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
CNOT9-205ENST00000433439 IL27Q8NEV9 243 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 ABHD8Q96I13 439 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 TMX3Q96JJ7 454 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 PIGSQ96S52 555 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 JMJD4Q9H9V9 463 aa17.81■□□□□ 0.44
CNOT9-205ENST00000433439 RAVER2Q9HCJ3 691 aaKnown RBP17.81■□□□□ 0.44
CNOT9-205ENST00000433439 SH2B1Q9NRF2 756 aaPredicted RBP17.81■□□□□ 0.44
CNOT9-205ENST00000433439 MYPNQ86TC9 1320 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 PARP14Q460N5 1801 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 CYTH3O43739 400 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 GCLCP48506 637 aaPredicted RBP17.8■□□□□ 0.44
CNOT9-205ENST00000433439 CDC37Q16543 378 aaPredicted RBP17.8■□□□□ 0.44
CNOT9-205ENST00000433439 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 PHKBQ93100 1093 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 BTBD7Q9P203 1132 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 TSKSQ9UJT2 592 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 BAZ2BQ9UIF8 2168 aaKnown RBP17.8■□□□□ 0.44
CNOT9-205ENST00000433439 RLFQ13129 1914 aa17.8■□□□□ 0.44
CNOT9-205ENST00000433439 NID2Q14112 1375 aa17.79■□□□□ 0.44
CNOT9-205ENST00000433439 CNTNAP5Q8WYK1 1306 aa17.79■□□□□ 0.44
CNOT9-205ENST00000433439 TLR2O60603 784 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms