RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 PLIN2Q99541 437 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 FOCADQ5VW36 1801 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 CCDC194A0A1B0GVG4 234 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
RFTN1-203ENST00000432519 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
RFTN1-203ENST00000432519 GNAQP50148 359 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 PPP1R3GB7ZBB8 358 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 NPR1P16066 1061 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 USP40Q9NVE5 1235 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 NOVP48745 357 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 NAPAP54920 295 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 NAALADL2Q58DX5 795 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 APTXQ7Z2E3 356 aaKnown RBP16.65■□□□□ 0.26
RFTN1-203ENST00000432519 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
RFTN1-203ENST00000432519 SPZ1Q9BXG8 430 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
RFTN1-203ENST00000432519 FAM196BA6NMK8 535 aa16.64■□□□□ 0.26
RFTN1-203ENST00000432519 PDHBP11177 359 aa16.64■□□□□ 0.26
RFTN1-203ENST00000432519 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.26
RFTN1-203ENST00000432519 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.26
RFTN1-203ENST00000432519 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.26
RFTN1-203ENST00000432519 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.26
RFTN1-203ENST00000432519 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.26
RFTN1-203ENST00000432519 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
RFTN1-203ENST00000432519 ZMYND12Q9H0C1 365 aa16.64■□□□□ 0.25
RFTN1-203ENST00000432519 TMEM260Q9NX78 707 aa16.64■□□□□ 0.25
RFTN1-203ENST00000432519 MAPK8IP1Q9UQF2 711 aa16.64■□□□□ 0.25
RFTN1-203ENST00000432519 NRXN2Q9P2S2 1712 aa16.64■□□□□ 0.25
RFTN1-203ENST00000432519 SMCO2A6NFE2 343 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 TEX33O43247 280 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
RFTN1-203ENST00000432519 CERS3Q8IU89 383 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 IQUBQ8NA54 791 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 DAGLBQ8NCG7 672 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 CCDC150Q8NCX0 1101 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 HSP90AA2PQ14568 343 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-203ENST00000432519 CEP135Q66GS9 1140 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 COA7Q96BR5 231 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 SCN9AQ15858 1988 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 PLSCR1O15162 318 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 SHMT1P34896 483 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 LETM2Q2VYF4 491 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
RFTN1-203ENST00000432519 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 GSDMAQ96QA5 445 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 ARID3AQ99856 593 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 GPCPD1Q9NPB8 672 aa16.63■□□□□ 0.25
RFTN1-203ENST00000432519 BIN2Q9UBW5 565 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-203ENST00000432519 ADKP55263 362 aaKnown RBP16.62■□□□□ 0.25
RFTN1-203ENST00000432519 PTPN14Q15678 1187 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 TTBK2Q6IQ55 1244 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 TMC4Q7Z404 712 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 CCDC148Q8NFR7 591 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 PPP1R13BQ96KQ4 1090 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 EDIL3O43854 480 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 ERCC5P28715 1186 aaPredicted RBP16.62■□□□□ 0.25
RFTN1-203ENST00000432519 CHRNA5P30532 468 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 NT5C2P49902 561 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 TCP10Q12799 353 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 JAKMIP3Q5VZ66 844 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 TMX1Q9H3N1 280 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
RFTN1-203ENST00000432519 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 LONP1P36776 959 aaKnown RBP16.61■□□□□ 0.25
RFTN1-203ENST00000432519 TBX2Q13207 712 aaPredicted RBP16.61■□□□□ 0.25
RFTN1-203ENST00000432519 DTHD1Q6ZMT9 781 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 RRP36Q96EU6 259 aaKnown RBP16.61■□□□□ 0.25
RFTN1-203ENST00000432519 MASTLQ96GX5 879 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 DACH1Q9UI36 760 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 ALDH1B1P30837 517 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 DISC1Q9NRI5 854 aa16.61■□□□□ 0.25
RFTN1-203ENST00000432519 CCNT1O60563 726 aaKnown RBP16.6■□□□□ 0.25
RFTN1-203ENST00000432519 PDE6BP35913 854 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 SLC16A2P36021 539 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 NR1I3Q14994 352 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 LZTS2Q9BRK4 669 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 MYH8P13535 1937 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 PPP1R11O60927 126 aaPredicted RBP16.6■□□□□ 0.25
RFTN1-203ENST00000432519 STAT6P42226 847 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 SPATA1Q5VX52 437 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 TC2NQ8N9U0 490 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 SLX4Q8IY92 1834 aa16.6■□□□□ 0.25
RFTN1-203ENST00000432519 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 G3V3G9 751 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 FANCGO15287 622 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 CRKP46108 304 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 DCAF8Q5TAQ9 597 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms