RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 ECE1P42892 770 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 P3H4Q92791 437 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 HYOU1Q9Y4L1 999 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 ATF2P15336 505 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 SLC1A4P43007 532 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 BRD3Q15059 726 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 LLPHQ9BRT6 129 aaKnown RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 GOLGA8HP0CJ92 632 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 AP1ARQ63HQ0 302 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 LRRC8CQ8TDW0 803 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 CXCR5P32302 372 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 TCP11Q8WWU5 503 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 PLCH2O75038 1416 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-206ENST00000431893 AZI2Q9H6S1 392 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 FANCLQ9NW38 375 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 CLIC4Q9Y696 253 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
SEC16A-206ENST00000431893 GNL1P36915 607 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-206ENST00000431893 RMDN2Q96LZ7 410 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 GPT2Q8TD30 523 aa12.54□□□□□ -0.4
SEC16A-206ENST00000431893 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
SEC16A-206ENST00000431893 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-206ENST00000431893 WDR91A4D1P6 747 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 SMCO2A6NFE2 343 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 K7ENM7 598 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 IL2RBP14784 551 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC16A-206ENST00000431893 EHHADHQ08426 723 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 TBK1Q9UHD2 729 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
SEC16A-206ENST00000431893 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 EIF4E1BA6NMX2 242 aaKnown RBP12.53□□□□□ -0.4
SEC16A-206ENST00000431893 SGK1O00141 431 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 SLCO1A2P46721 670 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 TMED2Q15363 201 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 KRT25Q7Z3Z0 450 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 APPBP2Q92624 585 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 EYA1Q99502 592 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
SEC16A-206ENST00000431893 STAT1P42224 750 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 POLE2P56282 527 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 EP400NLQ6ZTU2 488 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 CD109Q6YHK3 1445 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 EYA2O00167 538 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 OATP04181 439 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 SCYL3Q8IZE3 742 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 SPATA5Q8NB90 893 aa12.53□□□□□ -0.4
SEC16A-206ENST00000431893 LRRD1A4D1F6 860 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 A6NNZ2 444 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 CAPN9O14815 690 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 NDUFA8P51970 172 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 TFAP4Q01664 338 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 TUBB8Q3ZCM7 444 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 SGSM2O43147 1006 aa12.52□□□□□ -0.4
SEC16A-206ENST00000431893 SMYD4Q8IYR2 804 aaPredicted RBP12.52□□□□□ -0.4
SEC16A-206ENST00000431893 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.4
SEC16A-206ENST00000431893 TRIP13Q15645 432 aaPredicted RBP12.52□□□□□ -0.41
SEC16A-206ENST00000431893 OTUD6AQ7L8S5 288 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 MYLK4Q86YV6 388 aaPredicted RBP12.52□□□□□ -0.41
SEC16A-206ENST00000431893 Q9H521 79 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
SEC16A-206ENST00000431893 PDE6CP51160 858 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 MRPS25P82663 173 aaKnown RBP12.52□□□□□ -0.41
SEC16A-206ENST00000431893 PTH1RQ03431 593 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 RFX6Q8HWS3 928 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 H7C0C1 242 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 HMGB2P26583 209 aaKnown RBP12.52□□□□□ -0.41
SEC16A-206ENST00000431893 ATP5OP48047 213 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 DYNLT1P63172 113 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 MESDQ14696 234 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.41
SEC16A-206ENST00000431893 CCDC127Q96BQ5 260 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 HOMER3Q9NSC5 361 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
SEC16A-206ENST00000431893 E2F4Q16254 413 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 PPP4R4Q6NUP7 873 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 SDCCAG3Q96C92 435 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 ZNF653Q96CK0 615 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 FAN1Q9Y2M0 1017 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 CD2APQ9Y5K6 639 aa12.51□□□□□ -0.41
SEC16A-206ENST00000431893 GNGT2O14610 69 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms