RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 RPS6KA4O75676 772 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 TXLNAP40222 546 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 MAP3K9P80192 1104 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 NUP88Q99567 741 aaPredicted RBP20.91■□□□□ 0.94
CHD1L-204ENST00000431239 MAD2L2Q9UI95 211 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 RTCBQ9Y3I0 505 aaKnown RBP20.91■□□□□ 0.94
CHD1L-204ENST00000431239 FHOD1Q9Y613 1164 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 CCDC88AQ3V6T2 1871 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 ABL1P00519 1130 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 PRCPP42785 496 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 TMCO3Q6UWJ1 677 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 C4orf32Q8N8J7 132 aa20.91■□□□□ 0.94
CHD1L-204ENST00000431239 TFRCP02786 760 aaKnown RBP20.9■□□□□ 0.94
CHD1L-204ENST00000431239 KCNJ18B7U540 433 aa20.9■□□□□ 0.94
CHD1L-204ENST00000431239 PNMA6AP0CW24 399 aaPredicted RBP20.9■□□□□ 0.94
CHD1L-204ENST00000431239 KCNJ12Q14500 433 aa20.9■□□□□ 0.94
CHD1L-204ENST00000431239 SPTY2D1Q68D10 685 aaPredicted RBP20.9■□□□□ 0.94
CHD1L-204ENST00000431239 ARGLU1Q9NWB6 273 aaPredicted RBP20.9■□□□□ 0.94
CHD1L-204ENST00000431239 BMS1Q14692 1282 aaKnown RBP20.89■□□□□ 0.94
CHD1L-204ENST00000431239 ZNF444Q8N0Y2 327 aaPredicted RBP20.89■□□□□ 0.94
CHD1L-204ENST00000431239 ZBTB9Q96C00 473 aa20.89■□□□□ 0.94
CHD1L-204ENST00000431239 NGLY1Q96IV0 654 aa20.89■□□□□ 0.94
CHD1L-204ENST00000431239 DISC1Q9NRI5 854 aa20.89■□□□□ 0.94
CHD1L-204ENST00000431239 MKRN1Q9UHC7 482 aaKnown RBP20.89■□□□□ 0.94
CHD1L-204ENST00000431239 PDS5AQ29RF7 1337 aaKnown RBP20.89■□□□□ 0.93
CHD1L-204ENST00000431239 COPB1P53618 953 aaKnown RBP20.89■□□□□ 0.93
CHD1L-204ENST00000431239 ZNF658Q5TYW1 1059 aaPredicted RBP20.89■□□□□ 0.93
CHD1L-204ENST00000431239 DTHD1Q6ZMT9 781 aa20.89■□□□□ 0.93
CHD1L-204ENST00000431239 RWDD2AQ9UIY3 292 aa20.89■□□□□ 0.93
CHD1L-204ENST00000431239 CT47A1Q5JQC4 288 aaPredicted RBP20.88■□□□□ 0.93
CHD1L-204ENST00000431239 ZNF569Q5MCW4 686 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 DGKHQ86XP1 1220 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 PUF60Q9UHX1 559 aaKnown RBP20.88■□□□□ 0.93
CHD1L-204ENST00000431239 PCDHA6Q9UN73 950 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 PCDHA8Q9Y5H6 950 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 TPM1P09493 284 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 LONP1P36776 959 aaKnown RBP20.88■□□□□ 0.93
CHD1L-204ENST00000431239 PMS1P54277 932 aaKnown RBP20.88■□□□□ 0.93
CHD1L-204ENST00000431239 TCP11X2Q5H9J9 407 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 CNGA4Q8IV77 575 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 ERVK-24P63145 666 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 UBXN1Q04323 297 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 GRM4Q14833 912 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 NAALADL2Q58DX5 795 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 TMEM47Q9BQJ4 181 aa20.88■□□□□ 0.93
CHD1L-204ENST00000431239 UBA7P41226 1012 aa20.87■□□□□ 0.93
CHD1L-204ENST00000431239 ARL6IP4Q66PJ3 421 aaKnown RBP20.87■□□□□ 0.93
CHD1L-204ENST00000431239 AMOTL1Q8IY63 956 aa20.87■□□□□ 0.93
CHD1L-204ENST00000431239 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
CHD1L-204ENST00000431239 FAM53CQ9NYF3 392 aa20.87■□□□□ 0.93
CHD1L-204ENST00000431239 KIF5CO60282 957 aa20.87■□□□□ 0.93
CHD1L-204ENST00000431239 GABPB1Q06547 395 aaPredicted RBP20.87■□□□□ 0.93
CHD1L-204ENST00000431239 IRS2Q9Y4H2 1338 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 ANKRD20A12PQ8NF67 263 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 WDR66Q8TBY9 1149 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 NAA15Q9BXJ9 866 aaKnown RBP20.86■□□□□ 0.93
CHD1L-204ENST00000431239 ABHD10Q9NUJ1 306 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 LIMA1Q9UHB6 759 aaKnown RBP20.86■□□□□ 0.93
CHD1L-204ENST00000431239 TNRC6CQ9HCJ0 1690 aaKnown RBP20.86■□□□□ 0.93
CHD1L-204ENST00000431239 RFC4P35249 363 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 LRRC15Q8TF66 581 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 RMND1Q9NWS8 449 aa20.86■□□□□ 0.93
CHD1L-204ENST00000431239 STXBP3O00186 592 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 BAG3O95817 575 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 TERF2Q15554 542 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 SLF1Q9BQI6 1058 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 KLRF2D3W0D1 207 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 RASA1P20936 1047 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 KRT9P35527 623 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 LETM2Q2VYF4 491 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 USP17L2Q6R6M4 530 aa20.85■□□□□ 0.93
CHD1L-204ENST00000431239 NAPAP54920 295 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 PYM1Q9BRP8 204 aaKnown RBP20.84■□□□□ 0.93
CHD1L-204ENST00000431239 M0R2N6 131 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 ZRANB2O95218 330 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHD1L-204ENST00000431239 BTDP43251 543 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 PLA2G4AP47712 749 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 KIF4BQ2VIQ3 1234 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 SLC35F6Q8N357 371 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 SH3GLB2Q9NR46 395 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 BARHL2Q9NY43 387 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 MAST2Q6P0Q8 1798 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 PARP1P09874 1014 aaKnown RBP20.84■□□□□ 0.93
CHD1L-204ENST00000431239 GRAPQ13588 217 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 IRF2BP1Q8IU81 584 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 CCDC148Q8NFR7 591 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 GRAPLQ8TC17 118 aaPredicted RBP20.84■□□□□ 0.93
CHD1L-204ENST00000431239 TRIM47Q96LD4 638 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 CHP1Q99653 195 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 PARD6BQ9BYG5 372 aa20.84■□□□□ 0.93
CHD1L-204ENST00000431239 CCNT1O60563 726 aaKnown RBP20.83■□□□□ 0.93
CHD1L-204ENST00000431239 POLR3GO15318 223 aaPredicted RBP20.83■□□□□ 0.92
CHD1L-204ENST00000431239 GNAQP50148 359 aa20.83■□□□□ 0.92
CHD1L-204ENST00000431239 SPAG1Q07617 926 aa20.83■□□□□ 0.92
CHD1L-204ENST00000431239 RC3H1Q5TC82 1133 aaKnown RBP20.83■□□□□ 0.92
CHD1L-204ENST00000431239 RSRC2Q7L4I2 434 aaKnown RBP20.83■□□□□ 0.92
CHD1L-204ENST00000431239 ZNF804AQ7Z570 1209 aa20.83■□□□□ 0.92
CHD1L-204ENST00000431239 GOLGA1Q92805 767 aa20.83■□□□□ 0.92
CHD1L-204ENST00000431239 EYA3Q99504 573 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms