RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 FBXO11Q86XK2 927 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 SYCE1Q8N0S2 351 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCH1-208ENST00000430669 MINPP1Q9UNW1 487 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-208ENST00000430669 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 LCORLQ8N3X6 602 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 ERO1AQ96HE7 468 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-208ENST00000430669 MRVI1Q9Y6F6 885 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 IKBKBO14920 756 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCH1-208ENST00000430669 TAX1BP1Q86VP1 789 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 GCNT3O95395 438 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 DNM2P50570 870 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 TNNC1P63316 161 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 ASIC2Q16515 512 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
PTCH1-208ENST00000430669 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
PTCH1-208ENST00000430669 MEGF6O75095 1541 aa12.83□□□□□ -0.35
PTCH1-208ENST00000430669 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.35
PTCH1-208ENST00000430669 KIFC2Q96AC6 838 aa12.83□□□□□ -0.35
PTCH1-208ENST00000430669 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.35
PTCH1-208ENST00000430669 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
PTCH1-208ENST00000430669 MORC3Q14149 939 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 DRC1Q96MC2 740 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 GUCA1BQ9UMX6 200 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 FLOT1O75955 427 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-208ENST00000430669 FNBP1Q96RU3 617 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-208ENST00000430669 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
PTCH1-208ENST00000430669 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
PTCH1-208ENST00000430669 PKP1Q13835 747 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 NOX5Q96PH1 765 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 MTUS1Q9ULD2 1270 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 PCDHB13Q9Y5F0 798 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTCH1-208ENST00000430669 EPHA10Q5JZY3 1008 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
PTCH1-208ENST00000430669 STAT2P52630 851 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 BIN2Q9UBW5 565 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-208ENST00000430669 SRPRBQ9Y5M8 271 aaKnown RBP12.82□□□□□ -0.36
PTCH1-208ENST00000430669 CSADQ9Y600 493 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 UBL4BQ8N7F7 174 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
PTCH1-208ENST00000430669 USP14P54578 494 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 FAM173BQ6P4H8 233 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 PLIN2Q99541 437 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 KCNJ18B7U540 433 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 KCNJ12Q14500 433 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 HERC4Q5GLZ8 1057 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-208ENST00000430669 NOP56O00567 594 aaKnown RBP12.82□□□□□ -0.36
PTCH1-208ENST00000430669 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 LZTFL1Q9NQ48 299 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 CALCOCO1Q9P1Z2 691 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 STK17AQ9UEE5 414 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-208ENST00000430669 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 TCHPQ9BT92 498 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 SLC5A4Q9NY91 659 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 VAV2P52735 878 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 MYCT1Q8N699 235 aa12.82□□□□□ -0.36
PTCH1-208ENST00000430669 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 OTUD7BQ6GQQ9 843 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 MYOCDQ8IZQ8 938 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 VPS16Q9H269 839 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 ZNF500O60304 480 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 INF2Q27J81 1249 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 NUP98P52948 1817 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 A6NNZ2 444 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 XRCC5P13010 732 aaKnown RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 RESTQ13127 1097 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 TUBB8Q3ZCM7 444 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 GJD4Q96KN9 370 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 PPP2R3AQ06190 1150 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 HDXQ7Z353 690 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 TDRD7Q8NHU6 1098 aaKnown RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms