RNA–Protein interactions for RNA: ENST00000429017.2

HOXD8-202, Transcript of homeobox D8, humanhuman

TSL 2 BASIC

Gene HOXD8, Length 1,608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-202ENST00000429017 SZT2Q5T011 3432 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 GPR75-ASB3A0A0A6YYF3 556 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 A0A1B0GUL7 405 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 TRIM75PA6NK02 468 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 CTNND1O60716 968 aaKnown RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 SGPL1O95470 568 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 INHAP05111 366 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ADH1AP07327 375 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ADD1P35611 737 aaKnown RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 UBXN2AP68543 259 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 MECOMQ03112 1051 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 FASTKD5Q7L8L6 764 aaKnown RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ACDQ96AP0 544 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 HMG20BQ9P0W2 317 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 SLC45A1Q9Y2W3 748 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ALPK3Q96L96 1907 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 PDS5AQ29RF7 1337 aaKnown RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 K7ELQ4 463 aaPredicted RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 FARP2O94887 1054 aaPredicted RBP8.11□□□□□ -1.11
HOXD8-202ENST00000429017 IRF5Q13568 498 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 TBC1D9Q6ZT07 1266 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 Q8N3U1 123 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 ANKRD13CQ8N6S4 541 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 GMCL1Q96IK5 515 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 AGTPBP1Q9UPW5 1226 aa8.11□□□□□ -1.11
HOXD8-202ENST00000429017 SIPA1L1O43166 1804 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 LOC285556D6RIA3 1793 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 TNPO2O14787 897 aaKnown RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 TRIM66O15016 1216 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 PEX10O60683 326 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 RARSP54136 660 aaKnown RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 JAG1P78504 1218 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 TRIM22Q8IYM9 498 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 ZGPATQ8N5A5 531 aaKnown RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 DIS3LQ8TF46 1054 aaKnown RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 NSUN4Q96CB9 384 aaKnown RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 DEFB118Q96PH6 123 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 HTATIP2Q9BUP3 242 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 API5Q9BZZ5 524 aaKnown RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 PAK6Q9NQU5 681 aaPredicted RBP8.1□□□□□ -1.11
HOXD8-202ENST00000429017 TMPRSS4Q9NRS4 437 aa8.1□□□□□ -1.11
HOXD8-202ENST00000429017 PLXNB2O15031 1838 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 ATAD5Q96QE3 1844 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 PTGIRP43119 386 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 SPP2Q13103 211 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 MTX1Q13505 466 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 SHROOM1Q2M3G4 852 aaPredicted RBP8.09□□□□□ -1.11
HOXD8-202ENST00000429017 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 LYSMD3Q7Z3D4 306 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 SMCR8Q8TEV9 937 aaPredicted RBP8.09□□□□□ -1.11
HOXD8-202ENST00000429017 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.09□□□□□ -1.11
HOXD8-202ENST00000429017 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 GJD2Q9UKL4 321 aa8.09□□□□□ -1.11
HOXD8-202ENST00000429017 RANBP2P49792 3224 aaKnown RBP8.09□□□□□ -1.11
HOXD8-202ENST00000429017 PNMA6EA0A0J9YXQ4 647 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 SRGAP3O43295 1099 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 TFRCP02786 760 aaKnown RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 CAP2P40123 477 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 MCAMP43121 646 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 HMGCS2P54868 508 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 FAM110CQ1W6H9 321 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 SH3RF3Q8TEJ3 882 aaPredicted RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 PAWRQ96IZ0 340 aaKnown RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 NEUROD6Q96NK8 337 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 OSBPL5Q9H0X9 879 aaPredicted RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 STAP2Q9UGK3 403 aa8.08□□□□□ -1.12
HOXD8-202ENST00000429017 COL2A1P02458 1487 aaPredicted RBP8.08□□□□□ -1.12
HOXD8-202ENST00000429017 KRBA1A5PL33 1030 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 DBN1Q16643 649 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 SH3D19Q5HYK7 790 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 SPATA5Q8NB90 893 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 PROCA1Q8NCQ7 364 aaPredicted RBP8.07□□□□□ -1.12
HOXD8-202ENST00000429017 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.07□□□□□ -1.12
HOXD8-202ENST00000429017 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
HOXD8-202ENST00000429017 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 AKAP2Q9Y2D5 859 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 NR2E3Q9Y5X4 410 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 CT47B1P0C2W7 299 aaPredicted RBP8.07□□□□□ -1.12
HOXD8-202ENST00000429017 RNF144AP50876 292 aaPredicted RBP8.07□□□□□ -1.12
HOXD8-202ENST00000429017 CTDSPL2Q05D32 466 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 ADGRA1Q86SQ6 560 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 TEX11Q8IYF3 940 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 GALNT6Q8NCL4 622 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 COA7Q96BR5 231 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 TXNRD2Q9NNW7 524 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 SNRKQ9NRH2 765 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 RAI14Q9P0K7 980 aa8.07□□□□□ -1.12
HOXD8-202ENST00000429017 USP17L5A8MUK1 530 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms