RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 CCL5P13501 91 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 STAT2P52630 851 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 KIFC2Q96AC6 838 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 APBA2Q99767 749 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 TEX13BQ9BXU2 312 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 SLC38A10Q9HBR0 1119 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 ZSWIM5Q9P217 1185 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 ZNF236Q9UL36 1845 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 ZBED4O75132 1171 aa20.27■□□□□ 0.84
LMCD1-204ENST00000426878 OAZ1P54368 228 aa20.27■□□□□ 0.84
LMCD1-204ENST00000426878 MLLT1Q03111 559 aaPredicted RBP20.27■□□□□ 0.84
LMCD1-204ENST00000426878 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
LMCD1-204ENST00000426878 NCAPG2Q86XI2 1143 aa20.27■□□□□ 0.84
LMCD1-204ENST00000426878 TRIB2Q92519 343 aa20.27■□□□□ 0.84
LMCD1-204ENST00000426878 LSG1Q9H089 658 aaKnown RBP20.27■□□□□ 0.84
LMCD1-204ENST00000426878 MKI67P46013 3256 aaKnown RBP20.27■□□□□ 0.84
LMCD1-204ENST00000426878 GJB1P08034 283 aa20.27■□□□□ 0.83
LMCD1-204ENST00000426878 ZSCAN10Q96SZ4 725 aaPredicted RBP20.27■□□□□ 0.83
LMCD1-204ENST00000426878 MYCP01106 439 aaPredicted RBP20.26■□□□□ 0.83
LMCD1-204ENST00000426878 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 ZKSCAN1P17029 563 aaPredicted RBP20.26■□□□□ 0.83
LMCD1-204ENST00000426878 CAPN2P17655 700 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 ADORA2AP29274 412 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 TRDNQ13061 729 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 MAP3K21Q5TCX8 1036 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 BTNL9Q6UXG8 535 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 RNF208Q9H0X6 261 aa20.26■□□□□ 0.83
LMCD1-204ENST00000426878 RBM8AQ9Y5S9 174 aaKnown RBP20.26■□□□□ 0.83
LMCD1-204ENST00000426878 TNRC18O15417 2968 aaPredicted RBP20.25■□□□□ 0.83
LMCD1-204ENST00000426878 IGHA2P01877 340 aa20.25■□□□□ 0.83
LMCD1-204ENST00000426878 PDHBP11177 359 aa20.25■□□□□ 0.83
LMCD1-204ENST00000426878 FCER1AP12319 257 aa20.25■□□□□ 0.83
LMCD1-204ENST00000426878 EN2P19622 333 aaPredicted RBP20.25■□□□□ 0.83
LMCD1-204ENST00000426878 CASC1Q6TDU7 716 aa20.25■□□□□ 0.83
LMCD1-204ENST00000426878 UNC93B1Q9H1C4 597 aa20.25■□□□□ 0.83
LMCD1-204ENST00000426878 PAK6Q9NQU5 681 aaPredicted RBP20.25■□□□□ 0.83
LMCD1-204ENST00000426878 CDC45O75419 566 aa20.24■□□□□ 0.83
LMCD1-204ENST00000426878 GJA8P48165 433 aa20.24■□□□□ 0.83
LMCD1-204ENST00000426878 CCL14Q16627 93 aa20.24■□□□□ 0.83
LMCD1-204ENST00000426878 SNRNP48Q6IEG0 339 aaKnown RBP20.24■□□□□ 0.83
LMCD1-204ENST00000426878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
LMCD1-204ENST00000426878 RASGRP2Q7LDG7 609 aa20.24■□□□□ 0.83
LMCD1-204ENST00000426878 ENAHQ8N8S7 591 aaPredicted RBP20.24■□□□□ 0.83
LMCD1-204ENST00000426878 SLC5A4Q9NY91 659 aa20.24■□□□□ 0.83
LMCD1-204ENST00000426878 CTDP1Q9Y5B0 961 aaPredicted RBP20.24■□□□□ 0.83
LMCD1-204ENST00000426878 RPTORQ8N122 1335 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 E7EWF7 191 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 IKQ13123 557 aaPredicted RBP20.23■□□□□ 0.83
LMCD1-204ENST00000426878 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 DPP9Q86TI2 863 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 UBAC1Q9BSL1 405 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 PRR12Q9ULL5 1215 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
LMCD1-204ENST00000426878 TAF6LQ9Y6J9 622 aa20.23■□□□□ 0.83
LMCD1-204ENST00000426878 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
LMCD1-204ENST00000426878 TNKSO95271 1327 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 COBLO75128 1261 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 ZNF543Q08ER8 600 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 TRIM32Q13049 653 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 OLFML2BQ68BL8 750 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 CPXCR1Q8N123 301 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 PNMA1Q8ND90 353 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 NCOA7Q8NI08 942 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 NPLOC4Q8TAT6 608 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 KAT14Q9H8E8 782 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
LMCD1-204ENST00000426878 HMX1Q9NP08 348 aaPredicted RBP20.22■□□□□ 0.83
LMCD1-204ENST00000426878 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 RIPK3Q9Y572 518 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 ZNF536O15090 1300 aa20.22■□□□□ 0.83
LMCD1-204ENST00000426878 SGPL1O95470 568 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 KCTD2Q14681 263 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 SEC23AQ15436 765 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 GPATCH4Q5T3I0 446 aaKnown RBP20.21■□□□□ 0.83
LMCD1-204ENST00000426878 MFSD14CQ5VZR4 134 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 STOX1Q6ZVD7 989 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 CYB5R4Q7L1T6 521 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
LMCD1-204ENST00000426878 CHMP4CQ96CF2 233 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 MMP19Q99542 508 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.21■□□□□ 0.83
LMCD1-204ENST00000426878 ANO2Q9NQ90 1003 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 FLRT1Q9NZU1 646 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
LMCD1-204ENST00000426878 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
LMCD1-204ENST00000426878 CACNB2Q08289 660 aaPredicted RBP20.2■□□□□ 0.82
LMCD1-204ENST00000426878 SYDE2Q5VT97 1194 aa20.2■□□□□ 0.82
LMCD1-204ENST00000426878 RALYLQ86SE5 291 aaKnown RBP20.2■□□□□ 0.82
LMCD1-204ENST00000426878 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
LMCD1-204ENST00000426878 CRISPLD2Q9H0B8 497 aa20.2■□□□□ 0.82
LMCD1-204ENST00000426878 RANBP17Q9H2T7 1088 aaKnown RBP20.2■□□□□ 0.82
LMCD1-204ENST00000426878 DIS3Q9Y2L1 958 aaKnown RBP20.2■□□□□ 0.82
LMCD1-204ENST00000426878 TKFCQ3LXA3 575 aa20.19■□□□□ 0.82
LMCD1-204ENST00000426878 IFIT1BQ5T764 474 aaKnown RBP20.19■□□□□ 0.82
LMCD1-204ENST00000426878 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms