RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.08
LSM8-204ENST00000424702 NASPP49321 788 aaPredicted RBP8.27□□□□□ -1.08
LSM8-204ENST00000424702 ZSCAN23Q3MJ62 389 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 KRT25Q7Z3Z0 450 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 TEX2Q8IWB9 1127 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 DIS3L2Q8IYB7 885 aaKnown RBP8.27□□□□□ -1.08
LSM8-204ENST00000424702 CMTR1Q8N1G2 835 aaKnown RBP8.27□□□□□ -1.08
LSM8-204ENST00000424702 FBXL16Q8N461 479 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 RNF26Q9BY78 433 aaPredicted RBP8.27□□□□□ -1.08
LSM8-204ENST00000424702 GRPEL1Q9HAV7 217 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 MTMR4Q9NYA4 1195 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 ADD3Q9UEY8 706 aaKnown RBP8.27□□□□□ -1.08
LSM8-204ENST00000424702 CCPG1Q9ULG6 757 aa8.27□□□□□ -1.08
LSM8-204ENST00000424702 BECN2A8MW95 431 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 TAF1CQ15572 869 aaPredicted RBP8.27□□□□□ -1.09
LSM8-204ENST00000424702 SLC44A5Q8NCS7 719 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 RNF214Q8ND24 703 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
LSM8-204ENST00000424702 CEP95Q96GE4 821 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 ATRNL1Q5VV63 1379 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 GOLGA6L19H0YKK7 550 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 SPTLC2O15270 562 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 GRM4Q14833 912 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 RGMBQ6NW40 437 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
LSM8-204ENST00000424702 TMEM47Q9BQJ4 181 aa8.27□□□□□ -1.09
LSM8-204ENST00000424702 DDTLA6NHG4 134 aaPredicted RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 FAM196BA6NMK8 535 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 ABCB11O95342 1321 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 EVCP57679 992 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 RILPL1Q5EBL4 403 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 COA7Q96BR5 231 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 WDR18Q9BV38 432 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 KIAA1683Q9H0B3 1180 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 F5H6K3 240 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 CTAGE5O15320 804 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 FOXP2O15409 715 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 SMARCA1P28370 1054 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 KLRC3Q07444 240 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 GRIK5Q16478 980 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 CAMK4Q16566 473 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 DEFB115Q30KQ5 88 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 MYSM1Q5VVJ2 828 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 NSMFQ6X4W1 530 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 PROCA1Q8NCQ7 364 aaPredicted RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 PYM1Q9BRP8 204 aaKnown RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 BIN2Q9UBW5 565 aaPredicted RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 KCNJ14Q9UNX9 436 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
LSM8-204ENST00000424702 STK24Q9Y6E0 443 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 STK36Q9NRP7 1315 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 ROBO3Q96MS0 1386 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 hCG_1642624A0A1W2PR95 340 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 GOLGA6L6A8MZA4 724 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 GCOM1H8Y6P7 765 aaPredicted RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 GADD45BO75293 160 aaPredicted RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 POLR2MP0CAP2 368 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 ALAS1P13196 640 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 CDC27P30260 824 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 PLCD1P51178 756 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 RESTQ13127 1097 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 COG2Q14746 738 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 ANO1Q5XXA6 986 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 CCDC174Q6PII3 467 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 NCAPG2Q86XI2 1143 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 DRC7Q8IY82 874 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 MRPS27Q92552 414 aaKnown RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 ARID3AQ99856 593 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 DDX4Q9NQI0 724 aaKnown RBP8.26□□□□□ -1.09
LSM8-204ENST00000424702 VPS54Q9P1Q0 977 aa8.26□□□□□ -1.09
LSM8-204ENST00000424702 NMT2O60551 498 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 SLC25A27O95847 323 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 HMGCS2P54868 508 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 MTMR2Q13614 643 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 ERMNQ8TAM6 284 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 NBPF3Q9H094 633 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 NAT10Q9H0A0 1025 aaKnown RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 SPC25Q9HBM1 224 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 COL11A2P13942 1736 aaPredicted RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 DKC1O60832 514 aaKnown RBP eCLIP8.25□□□□□ -1.09
LSM8-204ENST00000424702 BACE1P56817 501 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 RPAP3Q9H6T3 665 aaPredicted RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 SENP2Q9HC62 589 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 DACT1Q9NYF0 836 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 FRMPD2Q68DX3 1309 aaPredicted RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 IRS2Q9Y4H2 1338 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 PRPF3O43395 683 aaKnown RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 YEATS4O95619 227 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 SCG2P13521 617 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 MARCKSP29966 332 aaPredicted RBP8.25□□□□□ -1.09
LSM8-204ENST00000424702 SHMT1P34896 483 aa8.25□□□□□ -1.09
LSM8-204ENST00000424702 FAM83BQ5T0W9 1011 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms