RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 TYW1BQ6NUM6 668 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 KANK3Q6NY19 840 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 DHX36Q9H2U1 1008 aaKnown RBP26.26■■□□□ 1.79
LSM8-203ENST00000422760 CPVLQ9H3G5 476 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 DNAJC18Q9H819 358 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 WNT7AO00755 349 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 EIF6P56537 245 aaKnown RBP26.26■■□□□ 1.79
LSM8-203ENST00000422760 CCAR2Q8N163 923 aaKnown RBP26.26■■□□□ 1.79
LSM8-203ENST00000422760 DACH1Q9UI36 760 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 KCNH3Q9ULD8 1083 aa26.26■■□□□ 1.79
LSM8-203ENST00000422760 ADAMTS3O15072 1205 aa26.25■■□□□ 1.79
LSM8-203ENST00000422760 SLURP2P0DP57 97 aa26.25■■□□□ 1.79
LSM8-203ENST00000422760 SFPQP23246 707 aaKnown RBP eCLIP26.25■■□□□ 1.79
LSM8-203ENST00000422760 CT47A1Q5JQC4 288 aaPredicted RBP26.25■■□□□ 1.79
LSM8-203ENST00000422760 KRBA2Q6ZNG9 492 aa26.25■■□□□ 1.79
LSM8-203ENST00000422760 LRRC47Q8N1G4 583 aaKnown RBP26.25■■□□□ 1.79
LSM8-203ENST00000422760 XPO4Q9C0E2 1151 aaKnown RBP26.25■■□□□ 1.79
LSM8-203ENST00000422760 DDTLA6NHG4 134 aaPredicted RBP26.24■■□□□ 1.79
LSM8-203ENST00000422760 USP17L5A8MUK1 530 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 SMC2O95347 1197 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 PDHBP11177 359 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 PIK3AP1Q6ZUJ8 805 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 HEATR3Q7Z4Q2 680 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 ZNF277Q9NRM2 450 aaPredicted RBP26.24■■□□□ 1.79
LSM8-203ENST00000422760 IFNKQ9P0W0 207 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 SRPRBQ9Y5M8 271 aaKnown RBP26.24■■□□□ 1.79
LSM8-203ENST00000422760 A0A087WWV3 80 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 NPM3O75607 178 aaKnown RBP26.24■■□□□ 1.79
LSM8-203ENST00000422760 TTLL1O95922 423 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 CFAP100Q494V2 611 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 SPECC1Q5M775 1068 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 TTC38Q5R3I4 469 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 BLIDQ8IZY5 108 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 LARGE2Q8N3Y3 721 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 TRIML1Q8N9V2 468 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 CCDC148Q8NFR7 591 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 BARHL2Q9NY43 387 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 PCDHA4Q9UN74 947 aa26.24■■□□□ 1.79
LSM8-203ENST00000422760 STXBP3O00186 592 aa26.23■■□□□ 1.79
LSM8-203ENST00000422760 ZBTB7AO95365 584 aa26.23■■□□□ 1.79
LSM8-203ENST00000422760 BMP15O95972 392 aa26.23■■□□□ 1.79
LSM8-203ENST00000422760 SH3BP5LQ7L8J4 393 aa26.23■■□□□ 1.79
LSM8-203ENST00000422760 PDCL2Q8N4E4 241 aa26.23■■□□□ 1.79
LSM8-203ENST00000422760 CNNM3Q8NE01 707 aa26.23■■□□□ 1.79
LSM8-203ENST00000422760 TDRD3Q9H7E2 651 aaKnown RBP26.23■■□□□ 1.79
LSM8-203ENST00000422760 FAM196BA6NMK8 535 aa26.22■■□□□ 1.79
LSM8-203ENST00000422760 MPHOSPH10O00566 681 aaKnown RBP26.22■■□□□ 1.79
LSM8-203ENST00000422760 SMARCA1P28370 1054 aa26.22■■□□□ 1.79
LSM8-203ENST00000422760 TRAPPC10P48553 1259 aa26.22■■□□□ 1.79
LSM8-203ENST00000422760 FANCCQ00597 558 aa26.22■■□□□ 1.79
LSM8-203ENST00000422760 ZSCAN29Q8IWY8 852 aaPredicted RBP26.22■■□□□ 1.79
LSM8-203ENST00000422760 KIF18AQ8NI77 898 aa26.22■■□□□ 1.79
LSM8-203ENST00000422760 PI4KBQ9UBF8 816 aa26.22■■□□□ 1.79
LSM8-203ENST00000422760 SNHG28P0DPA3 235 aa26.21■■□□□ 1.79
LSM8-203ENST00000422760 NT5DC1Q5TFE4 455 aa26.21■■□□□ 1.79
LSM8-203ENST00000422760 RSBN1LQ6PCB5 846 aaPredicted RBP26.21■■□□□ 1.79
LSM8-203ENST00000422760 HOMER1Q86YM7 354 aa26.21■■□□□ 1.79
LSM8-203ENST00000422760 CCDC17Q96LX7 622 aa26.21■■□□□ 1.79
LSM8-203ENST00000422760 FRMPD2Q68DX3 1309 aaPredicted RBP26.21■■□□□ 1.79
LSM8-203ENST00000422760 BRCA1P38398 1863 aaKnown RBP26.2■■□□□ 1.79
LSM8-203ENST00000422760 RAD17O75943 681 aa26.2■■□□□ 1.79
LSM8-203ENST00000422760 ASPRV1Q53RT3 343 aa26.2■■□□□ 1.79
LSM8-203ENST00000422760 DAGLBQ8NCG7 672 aa26.2■■□□□ 1.79
LSM8-203ENST00000422760 RRP36Q96EU6 259 aaKnown RBP26.2■■□□□ 1.79
LSM8-203ENST00000422760 PRMT6Q96LA8 375 aaPredicted RBP26.2■■□□□ 1.79
LSM8-203ENST00000422760 M0R2N6 131 aa26.2■■□□□ 1.78
LSM8-203ENST00000422760 PRKCSHP14314 528 aaPredicted RBP26.2■■□□□ 1.78
LSM8-203ENST00000422760 ZNF174Q15697 407 aa26.2■■□□□ 1.78
LSM8-203ENST00000422760 TMC6Q7Z403 805 aa26.2■■□□□ 1.78
LSM8-203ENST00000422760 FAM177A1Q8N128 213 aaPredicted RBP26.2■■□□□ 1.78
LSM8-203ENST00000422760 RASGRP4Q8TDF6 673 aa26.2■■□□□ 1.78
LSM8-203ENST00000422760 CSRNP2Q9H175 543 aa26.2■■□□□ 1.78
LSM8-203ENST00000422760 SEC63Q9UGP8 760 aaKnown RBP26.2■■□□□ 1.78
LSM8-203ENST00000422760 ATRNL1Q5VV63 1379 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 PSMD14O00487 310 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 BIN1O00499 593 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 GALNT17Q6IS24 598 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 FCHSD1Q86WN1 690 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 MLKLQ8NB16 471 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 FEZ1Q99689 392 aa26.19■■□□□ 1.78
LSM8-203ENST00000422760 SOGA3Q5TF21 947 aa26.18■■□□□ 1.78
LSM8-203ENST00000422760 PIGSQ96S52 555 aa26.18■■□□□ 1.78
LSM8-203ENST00000422760 UBA5Q9GZZ9 404 aa26.18■■□□□ 1.78
LSM8-203ENST00000422760 CGNQ9P2M7 1197 aaKnown RBP26.18■■□□□ 1.78
LSM8-203ENST00000422760 COL2A1P02458 1487 aaPredicted RBP26.18■■□□□ 1.78
LSM8-203ENST00000422760 ENTPD3O75355 529 aa26.18■■□□□ 1.78
LSM8-203ENST00000422760 VIL1P09327 827 aaKnown RBP26.18■■□□□ 1.78
LSM8-203ENST00000422760 LONRF3Q496Y0 759 aa26.18■■□□□ 1.78
LSM8-203ENST00000422760 METTL16Q86W50 562 aaKnown RBP26.18■■□□□ 1.78
LSM8-203ENST00000422760 RIOX1Q9H6W3 641 aa26.18■■□□□ 1.78
LSM8-203ENST00000422760 NAPAP54920 295 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 ATP2C1P98194 919 aaPredicted RBP26.17■■□□□ 1.78
LSM8-203ENST00000422760 ARID5BQ14865 1188 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 CCDC125Q86Z20 511 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 SMAP1Q8IYB5 467 aaPredicted RBP26.17■■□□□ 1.78
LSM8-203ENST00000422760 FERMT2Q96AC1 680 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 GMLQ99445 158 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 TRIM34Q9BYJ4 488 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 VAT1LQ9HCJ6 419 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 PIM2Q9P1W9 311 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 1139.2 ms