RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
SEC24D-202ENST00000419654 RILPL1Q5EBL4 403 aa17.38■□□□□ 0.37
SEC24D-202ENST00000419654 DESI2Q9BSY9 194 aa17.38■□□□□ 0.37
SEC24D-202ENST00000419654 EPC1Q9H2F5 836 aa17.38■□□□□ 0.37
SEC24D-202ENST00000419654 APOBEC3HQ6NTF7 200 aaKnown RBP17.38■□□□□ 0.37
SEC24D-202ENST00000419654 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
SEC24D-202ENST00000419654 FOXP1Q9H334 677 aaPredicted RBP17.38■□□□□ 0.37
SEC24D-202ENST00000419654 USP17L3A6NCW0 530 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 USP17L4A6NCW7 530 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 URI1O94763 535 aaPredicted RBP17.37■□□□□ 0.37
SEC24D-202ENST00000419654 PKN1Q16512 942 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 USP17L1Q7RTZ2 530 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 FAM237AA0A1B0GTK4 181 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 CBFA2T2O43439 604 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 ZBTB9Q96C00 473 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 ERO1AQ96HE7 468 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 DDX4Q9NQI0 724 aaKnown RBP17.37■□□□□ 0.37
SEC24D-202ENST00000419654 ST7Q9NRC1 585 aa17.37■□□□□ 0.37
SEC24D-202ENST00000419654 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 CRKP46108 304 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 USP40Q9NVE5 1235 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 ACTN4O43707 911 aaKnown RBP17.36■□□□□ 0.37
SEC24D-202ENST00000419654 HDLBPQ00341 1268 aaKnown RBP17.36■□□□□ 0.37
SEC24D-202ENST00000419654 MTF1Q14872 753 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 TOGARAM2Q6ZUX3 1019 aa17.36■□□□□ 0.37
SEC24D-202ENST00000419654 PSDA5PKW4 1024 aaPredicted RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 VWA3AA6NCI4 1184 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 TEX33O43247 280 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 PRPF3O43395 683 aaKnown RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 DPEP1P16444 411 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 CDC25AP30304 524 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 SYMPKQ92797 1274 aaKnown RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 SRPRBQ9Y5M8 271 aaKnown RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 PSME4Q14997 1843 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 TRIM75PA6NK02 468 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 GABPAQ06546 454 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 KARSQ15046 597 aaKnown RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 CTCFLQ8NI51 663 aaPredicted RBP17.35■□□□□ 0.37
SEC24D-202ENST00000419654 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
SEC24D-202ENST00000419654 PICALMQ13492 652 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 SYCP1Q15431 976 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 REXO1L1PQ8IX06 675 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 PSMD1Q99460 953 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 HOOK1Q9UJC3 728 aaKnown RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 A0A0U1RQJ8 604 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 PPIP5K2O43314 1243 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 ETF1P62495 437 aaKnown RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 MORC3Q14149 939 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 TRIM65Q6PJ69 517 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 ZNF397Q8NF99 534 aaPredicted RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 ATRIPQ8WXE1 791 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 OGFRQ9NZT2 677 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 CNTNAP5Q8WYK1 1306 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 KRT2P35908 639 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 DMTNQ08495 405 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 TMEM139Q8IV31 216 aa17.34■□□□□ 0.37
SEC24D-202ENST00000419654 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 IRX2Q9BZI1 471 aaPredicted RBP17.34■□□□□ 0.37
SEC24D-202ENST00000419654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.372e-7■■□□□ 13.1
SEC24D-202ENST00000419654 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 ARHGAP29Q52LW3 1261 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 WDR24Q96S15 920 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 PPP2R2CQ9Y2T4 447 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 NOVP48745 357 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 CARD6Q9BX69 1037 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 ZNF446Q9NWS9 450 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 SERPINA10Q9UK55 444 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.36
SEC24D-202ENST00000419654 KIF5BP33176 963 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 SARSP49591 514 aaKnown RBP17.32■□□□□ 0.36
SEC24D-202ENST00000419654 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 TC2NQ8N9U0 490 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 PLIN4Q96Q06 1357 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 KIF2AO00139 706 aaPredicted RBP17.32■□□□□ 0.36
SEC24D-202ENST00000419654 MCM7P33993 719 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 GNG11P61952 73 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 FEZ1Q99689 392 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
SEC24D-202ENST00000419654 MYH8P13535 1937 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 NFIAQ12857 509 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 PTGDRQ13258 359 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 GRM4Q14833 912 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 PHF20Q9BVI0 1012 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
SEC24D-202ENST00000419654 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms