RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
ATG4B-208ENST00000419606 TESPA1A2RU30 521 aaPredicted RBP14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L15C9J2P7 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L13C9JLJ4 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L11C9JVI0 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L18D6R9N7 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L22D6RA61 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L17D6RBQ6 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L19D6RCP7 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L20D6RJB6 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 IGF2BP3O00425 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
ATG4B-208ENST00000419606 PEX10O60683 326 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 FLOT1O75955 427 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 VEGFBP49765 207 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 USP17L24Q0WX57 530 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 POTEEQ6S8J3 1075 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 BTNL9Q6UXG8 535 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 NSUN7Q8NE18 718 aaKnown RBP14.91□□□□□ -0.02
ATG4B-208ENST00000419606 JMJD4Q9H9V9 463 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 FEM1BQ9UK73 627 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 PRR12Q9ULL5 1215 aa14.91□□□□□ -0.02
ATG4B-208ENST00000419606 WDR33Q9C0J8 1336 aaKnown RBP14.91□□□□□ -0.02
ATG4B-208ENST00000419606 COL11A1P12107 1806 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 MANSC4A6NHS7 340 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 HSPA6P17066 643 aa14.9□□□□□ -0.02
ATG4B-208ENST00000419606 IFNAR1P17181 557 aa14.9□□□□□ -0.02
ATG4B-208ENST00000419606 TAL1P17542 331 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 HOXA7P31268 230 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 ANP32AP39687 249 aaKnown RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 STAT2P52630 851 aa14.9□□□□□ -0.02
ATG4B-208ENST00000419606 SYDE2Q5VT97 1194 aa14.9□□□□□ -0.02
ATG4B-208ENST00000419606 ATG4CQ96DT6 458 aa14.9□□□□□ -0.02
ATG4B-208ENST00000419606 P2RX7Q99572 595 aaKnown RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 ASCC2Q9H1I8 757 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-208ENST00000419606 RIOX1Q9H6W3 641 aa14.9□□□□□ -0.02
ATG4B-208ENST00000419606 CCDC196A0A1B0GTZ2 297 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 PDHXO00330 501 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 CPLX1O14810 134 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 CYP2C8P10632 490 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 FDPSP14324 419 aaKnown RBP14.89□□□□□ -0.03
ATG4B-208ENST00000419606 DSG3P32926 999 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 GNAQP50148 359 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 ANKRD23Q86SG2 305 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 HOMER1Q86YM7 354 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 PIGSQ96S52 555 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 SLF1Q9BQI6 1058 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 SPZ1Q9BXG8 430 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 SLC26A6Q9BXS9 759 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
ATG4B-208ENST00000419606 MYH6P13533 1939 aa14.89□□□□□ -0.03
ATG4B-208ENST00000419606 SPDYE16A6NNV3 312 aaPredicted RBP14.88□□□□□ -0.03
ATG4B-208ENST00000419606 DHX16O60231 1041 aaKnown RBP14.88□□□□□ -0.03
ATG4B-208ENST00000419606 PLA2G6O60733 806 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 PPP1R11O60927 126 aaPredicted RBP14.88□□□□□ -0.03
ATG4B-208ENST00000419606 NOGQ13253 232 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 COG2Q14746 738 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 PPP2R5BQ15173 497 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 PKN1Q16512 942 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 FAM160B2Q86V87 743 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 PRPF38AQ8NAV1 312 aaKnown RBP14.88□□□□□ -0.03
ATG4B-208ENST00000419606 SMARCC2Q8TAQ2 1214 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 CHURC1Q8WUH1 139 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 AIFM3Q96NN9 605 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 LZTS2Q9BRK4 669 aa14.88□□□□□ -0.03
ATG4B-208ENST00000419606 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 A0A0G2JMZ2 1700 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 FMNL1O95466 1100 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-208ENST00000419606 TM4SF4P48230 202 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 FOSBP53539 338 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 IRX3P78415 501 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-208ENST00000419606 SSRP1Q08945 709 aaKnown RBP14.87□□□□□ -0.03
ATG4B-208ENST00000419606 BECN1Q14457 450 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 QRICH1Q2TAL8 776 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 CCDC174Q6PII3 467 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 REPS2Q8NFH8 660 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 SHISA4Q96DD7 197 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 MTMR8Q96EF0 704 aa14.87□□□□□ -0.03
ATG4B-208ENST00000419606 THSD7BQ9C0I4 1608 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 VWA5AO00534 786 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 PRPF3O43395 683 aaKnown RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 CNMDO75829 334 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 OSBPP22059 807 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 SMARCA1P28370 1054 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 HERVK_113P62684 666 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 CDC37Q16543 378 aaPredicted RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 CPLX2Q6PUV4 134 aaKnown RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 LLPHQ9BRT6 129 aaKnown RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 RANBP17Q9H2T7 1088 aaKnown RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 RAVER2Q9HCJ3 691 aaKnown RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 GJB4Q9NTQ9 266 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 BTBD7Q9P203 1132 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 ORC3Q9UBD5 711 aaPredicted RBP14.86□□□□□ -0.03
ATG4B-208ENST00000419606 ADAMTS5Q9UNA0 930 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 ZNF536O15090 1300 aa14.86□□□□□ -0.03
ATG4B-208ENST00000419606 GJB2P29033 226 aa14.85□□□□□ -0.03
ATG4B-208ENST00000419606 INHBEP58166 350 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms