RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SEPT4O43236 478 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
NUP50-205ENST00000419387 TTLL1O95922 423 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 TSPY3P0CV98 308 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 TSPY8P0CW00 308 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 SYN1P17600 705 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 BMP8BP34820 402 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 TFAP4Q01664 338 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 LRRC26Q2I0M4 334 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 FAM47AQ5JRC9 791 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 PRAMEF19Q5SWL8 479 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 CCDC129Q6ZRS4 1044 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
NUP50-205ENST00000419387 SENP6Q9GZR1 1112 aaPredicted RBP11.22□□□□□ -0.61
NUP50-205ENST00000419387 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 ZNF236Q9UL36 1845 aa11.22□□□□□ -0.61
NUP50-205ENST00000419387 DIS3Q9Y2L1 958 aaKnown RBP11.22□□□□□ -0.61
NUP50-205ENST00000419387 SUPT16HQ9Y5B9 1047 aaKnown RBP11.22□□□□□ -0.61
NUP50-205ENST00000419387 PARP14Q460N5 1801 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 DNM1LO00429 736 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 FOXP2O15409 715 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 ZBED4O75132 1171 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 PGK2P07205 417 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
NUP50-205ENST00000419387 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 HELLSQ9NRZ9 838 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 FEM1BQ9UK73 627 aa11.21□□□□□ -0.61
NUP50-205ENST00000419387 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
NUP50-205ENST00000419387 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.62
NUP50-205ENST00000419387 PLIN4Q96Q06 1357 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 POTEMA6NI47 508 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 ALX1Q15699 326 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
NUP50-205ENST00000419387 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 SLFN13Q68D06 897 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
NUP50-205ENST00000419387 KIFC2Q96AC6 838 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
NUP50-205ENST00000419387 INCENPQ9NQS7 918 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.2□□□□□ -0.62
NUP50-205ENST00000419387 RIPK3Q9Y572 518 aa11.2□□□□□ -0.62
NUP50-205ENST00000419387 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
NUP50-205ENST00000419387 COL11A1P12107 1806 aaPredicted RBP11.19□□□□□ -0.62
NUP50-205ENST00000419387 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 TMEM232C9JQI7 657 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 KBTBD13C9JR72 458 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 FDX1P10109 184 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 BMP3P12645 472 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 MAGEA10P43363 369 aaPredicted RBP11.19□□□□□ -0.62
NUP50-205ENST00000419387 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
NUP50-205ENST00000419387 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 SMC5Q8IY18 1101 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 DDX11Q96FC9 970 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 LNPKQ9C0E8 428 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
NUP50-205ENST00000419387 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
NUP50-205ENST00000419387 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 FGAP02671 866 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 TAL1P17542 331 aaPredicted RBP11.18□□□□□ -0.62
NUP50-205ENST00000419387 STAT2P52630 851 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 OAZ1P54368 228 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 LRRC41Q15345 812 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 SLC39A5Q6ZMH5 540 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
NUP50-205ENST00000419387 CHURC1Q8WUH1 139 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 FAM227BQ96M60 508 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
NUP50-205ENST00000419387 IL17RBQ9NRM6 502 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 TACC3Q9Y6A5 838 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 FRMPD3Q5JV73 1810 aa11.18□□□□□ -0.62
NUP50-205ENST00000419387 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 DNAJC25-GNG10A0A024R161 153 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 A0A0D9SFI3 127 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 ORC4O43929 436 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
NUP50-205ENST00000419387 PLA2G6O60733 806 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 IGHDP01880 384 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 FGRP09769 529 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
NUP50-205ENST00000419387 RARBP10826 455 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 MCCP23508 829 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 SLC1A4P43007 532 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 RTP1P59025 263 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 RCSD1Q6JBY9 416 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms