RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SHCBP1Q8NEM2 672 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 LZTS2Q9BRK4 669 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 RANBP17Q9H2T7 1088 aaKnown RBP13.91□□□□□ -0.18
ATG4B-207ENST00000415107 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-207ENST00000415107 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 ZNF214Q9UL59 606 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-207ENST00000415107 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 ZNF236Q9UL36 1845 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 RAD21O60216 631 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 FKTNO75072 461 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 CPA1P15085 419 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 GNAQP50148 359 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 CCNA1P78396 465 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 TOB2Q14106 344 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 RASGRP2Q7LDG7 609 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 ZNF296Q8WUU4 475 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 ERO1AQ96HE7 468 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 TCEANC2Q96MN5 208 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 MAF1Q9H063 256 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
ATG4B-207ENST00000415107 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
ATG4B-207ENST00000415107 SLC25A27O95847 323 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 SYDE2Q5VT97 1194 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 NFXL1Q6ZNB6 911 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 RIOX2Q8IUF8 465 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 ANKRD13CQ8N6S4 541 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 BRF1Q92994 677 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 ZNF274Q96GC6 653 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-207ENST00000415107 SPZ1Q9BXG8 430 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 TEX13BQ9BXU2 312 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 SPATC1LQ9H0A9 340 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 PDRG1Q9NUG6 133 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 CPA4Q9UI42 421 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 MGAMO43451 1857 aa13.89□□□□□ -0.19
ATG4B-207ENST00000415107 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 ZBTB43O43298 467 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 ZBED4O75132 1171 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 MAPK4P31152 587 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 FGD1P98174 961 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 ARHGEF6Q15052 776 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 RABEP1Q15276 862 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 FANCBQ8NB91 859 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 ZNF536O15090 1300 aa13.88□□□□□ -0.19
ATG4B-207ENST00000415107 FRMPD2Q68DX3 1309 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-207ENST00000415107 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 ICAM1P05362 532 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 TKFCQ3LXA3 575 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 TTBK2Q6IQ55 1244 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 TMTC3Q6ZXV5 915 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 STAG2Q8N3U4 1231 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 KIFC2Q96AC6 838 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 MROH8Q9H579 483 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 GPCPD1Q9NPB8 672 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 CASP8AP2Q9UKL3 1982 aa13.87□□□□□ -0.19
ATG4B-207ENST00000415107 CYTH3O43739 400 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 STAT3P40763 770 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 LBX1P52954 281 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 PRMT2P55345 433 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 FCGRTP55899 365 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 APOBRQ0VD83 1088 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-207ENST00000415107 KIF22Q14807 665 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 RTN1Q16799 776 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 Q3C1V9 767 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 ADGRF4Q8IZF3 695 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 ABRAQ8N0Z2 381 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 NUP133Q8WUM0 1156 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 PAGR1Q9BTK6 254 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
ATG4B-207ENST00000415107 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 FAM217BQ9NTX9 383 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-207ENST00000415107 TSKSQ9UJT2 592 aa13.86□□□□□ -0.19
ATG4B-207ENST00000415107 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 STRNO43815 780 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 PDIA3P30101 505 aaKnown RBP13.85□□□□□ -0.19
ATG4B-207ENST00000415107 SLC16A2P36021 539 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG4B-207ENST00000415107 NEK4P51957 841 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms