RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 CCDC140Q96MF4 163 aa5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 PRDM14Q9GZV8 571 aa5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 LGR6Q9HBX8 967 aa5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 PRDM5Q9NQX1 630 aaPredicted RBP5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 INTS7Q9NVH2 962 aaKnown RBP5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 KCNH3Q9ULD8 1083 aa5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 TPX2Q9ULW0 747 aaKnown RBP5.75□□□□□ -1.49
RNU2-28P-201ENST00000410457 PRODHO43272 600 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 TBX1O43435 398 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 STAT3P40763 770 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 CBX2Q14781 532 aaPredicted RBP5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 SFRP5Q5T4F7 317 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 BEND4Q6ZU67 534 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 THNSL2Q86YJ6 484 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 CLEC10AQ8IUN9 316 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 FIBCD1Q8N539 461 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 DTWD2Q8NBA8 298 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 ADCY4Q8NFM4 1077 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 FAM83CQ9BQN1 747 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 IER2Q9BTL4 223 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 SSBP4Q9BWG4 385 aaPredicted RBP5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 NKX2-4Q9H2Z4 354 aa5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 SF3B6Q9Y3B4 125 aaKnown RBP5.74□□□□□ -1.49
RNU2-28P-201ENST00000410457 IGF2BP3O00425 579 aaKnown RBP eCLIP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 SIGLEC6O43699 453 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 KCNH1O95259 989 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 RAPGEF3O95398 923 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 SCG5P05408 212 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 HOXC12P31275 282 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 MAP4K2Q12851 820 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 SNW1Q13573 536 aaKnown RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 NFKBIBQ15653 356 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 GTF2IRD2BQ6EKJ0 949 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 FAM214BQ7L5A3 538 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 GTF2IRD2Q86UP8 949 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 DHX37Q8IY37 1157 aaKnown RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 RPUSD2Q8IZ73 545 aaKnown RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 PIWIL2Q8TC59 973 aaKnown RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 ENOX1Q8TC92 643 aaKnown RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 BTN2A2Q8WVV5 523 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 KCTD13Q8WZ19 329 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 BRF1Q92994 677 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 Q96M66 194 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 SPOCK3Q9BQ16 436 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 LGR4Q9BXB1 951 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 KCNF1Q9H3M0 494 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 NOL6Q9H6R4 1146 aaKnown RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 MAGEC2Q9UBF1 373 aaPredicted RBP5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 GTF2IRD1Q9UHL9 959 aa5.73□□□□□ -1.49
RNU2-28P-201ENST00000410457 A0A087X0B3 334 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 IRS4O14654 1257 aaPredicted RBP5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 DLX3O60479 287 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 EFCAB14O75071 495 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 RAB11FIP3O75154 756 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 LEFTY1O75610 366 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CPP00450 1065 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 C6orf222P0C671 652 aaPredicted RBP5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 FAM87AP0C7U9 286 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 ZNF865P0CJ78 1059 aaPredicted RBP5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 MYCLP1P12525 358 aaPredicted RBP5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 GFRA1P56159 465 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 GABREP78334 506 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 OGFOD3Q6PK18 319 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CHAC2Q8WUX2 184 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 GATA6Q92908 595 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CLUHP3Q96NS8 147 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CAAP1Q9H8G2 361 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 METTL14Q9HCE5 456 aaKnown RBP5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CYP26B1Q9NR63 512 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CHST7Q9NS84 486 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 TYW1Q9NV66 732 aaKnown RBP5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 GFOD1Q9NXC2 390 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 MAPRE3Q9UPY8 281 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 CNTNAP4Q9C0A0 1308 aa5.72□□□□□ -1.49
RNU2-28P-201ENST00000410457 PDE8AO60658 829 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 LRRN2O75325 713 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 GSNP06396 782 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 ITIH2P19823 946 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 SOX5P35711 763 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 AMPD2Q01433 879 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 NMIQ13287 307 aaPredicted RBP5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 C21orf62-AS1Q17RA5 79 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 CYP27C1Q4G0S4 372 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 MAMDC2Q7Z304 686 aaPredicted RBP5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 TMC3Q7Z5M5 1100 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 ZAR1Q86SH2 424 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 C1orf159Q96HA4 380 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 ASCC2Q9H1I8 757 aaPredicted RBP5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.5
RNU2-28P-201ENST00000410457 GSG1L2A8MUP6 293 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 PRAMEF1O95521 474 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 POU4F1Q01851 419 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 CYP27A1Q02318 531 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 PPP2R5DQ14738 602 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 SLC35F1Q5T1Q4 408 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 RNF180Q86T96 592 aa5.7□□□□□ -1.5
RNU2-28P-201ENST00000410457 LRRTM3Q86VH5 581 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms