RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ASPSCR1Q9BZE9 553 aa6.41□□□□□ -1.38
LSM5-205ENST00000409952 NCOA5Q9HCD5 579 aaKnown RBP6.41□□□□□ -1.38
LSM5-205ENST00000409952 BSDC1Q9NW68 430 aaPredicted RBP6.41□□□□□ -1.38
LSM5-205ENST00000409952 FAM170BA6NMN3 283 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 FANCGO15287 622 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 SUSD5O60279 629 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 KATNA1O75449 491 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 LDHAP00338 332 aaKnown RBP6.4□□□□□ -1.38
LSM5-205ENST00000409952 HOXA10P31260 410 aaPredicted RBP6.4□□□□□ -1.38
LSM5-205ENST00000409952 RAB27AP51159 221 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 NEK2P51955 445 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 LONRF3Q496Y0 759 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 HSP90AB4PQ58FF6 505 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
LSM5-205ENST00000409952 PPP4R4Q6NUP7 873 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 CYFIP1Q7L576 1253 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 NECAB2Q7Z6G3 386 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 NBPF11Q86T75 865 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 CHPFQ8IZ52 775 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 FBXL6Q8N531 539 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 GIMAP7Q8NHV1 300 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 IL17RAQ96F46 866 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 TARS2Q9BW92 718 aaKnown RBP6.4□□□□□ -1.38
LSM5-205ENST00000409952 ZNF700Q9H0M5 742 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 DAGLAQ9Y4D2 1042 aa6.4□□□□□ -1.38
LSM5-205ENST00000409952 DNAJC25-GNG10A0A024R161 153 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 AKAP10O43572 662 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 GRIN3BO60391 1043 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 PRNPP04156 253 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 SSTR4P31391 388 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 GRIK1P39086 918 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 CYP27A1Q02318 531 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 INPP5AQ14642 412 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 SYCP2LQ5T4T6 812 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 ZBTB37Q5TC79 503 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 C14orf80Q86SX3 495 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 KISS1RQ969F8 398 aaPredicted RBP6.39□□□□□ -1.39
LSM5-205ENST00000409952 OSBPL1AQ9BXW6 950 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 MAF1Q9H063 256 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 PHAXQ9H814 394 aaKnown RBP6.39□□□□□ -1.39
LSM5-205ENST00000409952 PIDD1Q9HB75 910 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 INTS7Q9NVH2 962 aaKnown RBP6.39□□□□□ -1.39
LSM5-205ENST00000409952 ZIM2Q9NZV7 527 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
LSM5-205ENST00000409952 E2F8A0AVK6 867 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 GFRA2O00451 464 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 EYA4O95677 639 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 DHX8Q14562 1220 aaKnown RBP6.38□□□□□ -1.39
LSM5-205ENST00000409952 PPM1JQ5JR12 505 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 LRFN4Q6PJG9 635 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 DDX46Q7L014 1031 aaKnown RBP6.38□□□□□ -1.39
LSM5-205ENST00000409952 ZNF765Q7L2R6 523 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 C11orf96Q7Z7L8 435 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 LRRTM3Q86VH5 581 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 TTC8Q8TAM2 541 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
LSM5-205ENST00000409952 ACSBG1Q96GR2 724 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 EXOC2Q96KP1 924 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 TERF2IPQ9NYB0 399 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 TACC3Q9Y6A5 838 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 SNCAIPQ9Y6H5 919 aa6.38□□□□□ -1.39
LSM5-205ENST00000409952 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 AGRPO00253 132 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 IFRD1O00458 451 aaPredicted RBP6.37□□□□□ -1.39
LSM5-205ENST00000409952 L1CAMP32004 1257 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 CAP2P40123 477 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 CCNFP41002 786 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 PIN1Q13526 163 aaPredicted RBP6.37□□□□□ -1.39
LSM5-205ENST00000409952 FOXB2Q5VYV0 432 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 CNNM4Q6P4Q7 775 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 UNC5AQ6ZN44 842 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 NFXL1Q6ZNB6 911 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 FAM214BQ7L5A3 538 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 C12orf40Q86WS4 652 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 PPM1KQ8N3J5 372 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 DHRS4Q9BTZ2 278 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 MRPL4Q9BYD3 311 aaKnown RBP6.37□□□□□ -1.39
LSM5-205ENST00000409952 CDH19Q9H159 772 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 PCMTD2Q9NV79 361 aa6.37□□□□□ -1.39
LSM5-205ENST00000409952 MRPS23Q9Y3D9 190 aaKnown RBP6.37□□□□□ -1.39
LSM5-205ENST00000409952 PRR36Q9H6K5 1346 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 LTBP3Q9NS15 1303 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 HTR3BO95264 441 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 CENPBP07199 599 aaPredicted RBP6.36□□□□□ -1.39
LSM5-205ENST00000409952 CDK5R2Q13319 367 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 MLECQ14165 292 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 ZYXQ15942 572 aaKnown RBP6.36□□□□□ -1.39
LSM5-205ENST00000409952 DUSP27Q5VZP5 1158 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 INTS3Q68E01 1043 aaKnown RBP6.36□□□□□ -1.39
LSM5-205ENST00000409952 NXNQ6DKJ4 435 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 KIAA1211LQ6NV74 962 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 UBE3DQ7Z6J8 389 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 STRA8Q7Z7C7 330 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms