RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SH2B1Q9NRF2 756 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 BRPF3Q9ULD4 1205 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 HPS5Q9UPZ3 1129 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 CTGFP29279 349 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 KIF5BP33176 963 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 PRMT2P55345 433 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 HERVK_113P62684 666 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 TROAPQ12815 778 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 SLFN13Q68D06 897 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 MICU3Q86XE3 530 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 HSCBQ8IWL3 235 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 CTCFLQ8NI51 663 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 NUP133Q8WUM0 1156 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 DCAF4Q8WV16 495 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 GMCL1Q96IK5 515 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 TPCN1Q9ULQ1 816 aa19.25■□□□□ 0.67
TSPAN4-208ENST00000409531 CCDC196A0A1B0GTZ2 297 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 NDUFB10O96000 172 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 PDHBP11177 359 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 PDIA3P30101 505 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 SLC1A4P43007 532 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 METAP2P50579 478 aaKnown RBP eCLIP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 FCGRTP55899 365 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 GPATCH4Q5T3I0 446 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 SLKQ9H2G2 1235 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 RPAP3Q9H6T3 665 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 MORF4L1Q9UBU8 362 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
TSPAN4-208ENST00000409531 NID2Q14112 1375 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 GOLGA8AA7E2F4 631 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 WDR46O15213 610 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 CD2BP2O95400 341 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 PARP1P09874 1014 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 SNHG28P0DPA3 235 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 ASPRV1Q53RT3 343 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 FANCBQ8NB91 859 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 MYL10Q9BUA6 226 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 RBM28Q9NW13 759 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
TSPAN4-208ENST00000409531 DHX16O60231 1041 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 BMP3P12645 472 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 GNAQP50148 359 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 BECN1Q14457 450 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 COG2Q14746 738 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 GRM4Q14833 912 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 RTN1Q16799 776 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 KIAA1755Q5JYT7 1200 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 GPRC5AQ8NFJ5 357 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 HOXC10Q9NYD6 342 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 SRRDQ9UH36 339 aa19.22■□□□□ 0.67
TSPAN4-208ENST00000409531 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 PFKFB2O60825 505 aa19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 STK3Q13188 491 aa19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 ME3Q16798 604 aa19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 TXNRD2Q9NNW7 524 aa19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 ISY1Q9ULR0 285 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-208ENST00000409531 PDE4DIPQ5VU43 2346 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 RXRAP19793 462 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 SOX10P56693 466 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 ZNF543Q08ER8 600 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 CPLX2Q6PUV4 134 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 POTEEQ6S8J3 1075 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 LBX2Q6XYB7 198 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 TMX3Q96JJ7 454 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 LZTS2Q9BRK4 669 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 RABGAP1Q9Y3P9 1069 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 RBM19Q9Y4C8 960 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 PTCH2Q9Y6C5 1203 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 MYH6P13533 1939 aa19.2■□□□□ 0.66
TSPAN4-208ENST00000409531 PALM3A6NDB9 673 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 TNPO2O14787 897 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 CPLX1O14810 134 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 CCT2P78371 535 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 Q3C1V9 767 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 FAM83BQ5T0W9 1011 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 RAB11FIP4Q86YS3 637 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 CCDC144CPQ8IYA2 1237 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 CHURC1Q8WUH1 139 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 GTF3C6Q969F1 213 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 COA7Q96BR5 231 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 MAD2L2Q9UI95 211 aa19.19■□□□□ 0.66
TSPAN4-208ENST00000409531 PARP14Q460N5 1801 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 KLRF2D3W0D1 207 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 PLA2G6O60733 806 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 LARGE1O95461 756 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 STAT2P52630 851 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 ERVK-9P63128 1117 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 ERVK-24P63145 666 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 NBPF11Q86T75 865 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 FAM160B2Q86V87 743 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms