RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PPP1R3GB7ZBB8 358 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 UBE2Q2LH0YL09 131 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 CARSP49589 748 aaKnown RBP14.24□□□□□ -0.13
HERC3-203ENST00000407637 VAV2P52735 878 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 SLC5A9Q2M3M2 681 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 PPP4R3AQ6IN85 833 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 C8orf74Q6P047 294 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 LIMA1Q9UHB6 759 aaKnown RBP14.24□□□□□ -0.13
HERC3-203ENST00000407637 KDM3BQ7LBC6 1761 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 ZSCAN5CA6NGD5 496 aaPredicted RBP14.24□□□□□ -0.13
HERC3-203ENST00000407637 HMGB1P1B2RPK0 211 aaPredicted RBP14.24□□□□□ -0.13
HERC3-203ENST00000407637 CXCR5P32302 372 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 GLE1Q53GS7 698 aaKnown RBP14.24□□□□□ -0.13
HERC3-203ENST00000407637 MAATS1Q7Z4T9 603 aa14.24□□□□□ -0.13
HERC3-203ENST00000407637 DBF4Q9UBU7 674 aaPredicted RBP14.24□□□□□ -0.13
HERC3-203ENST00000407637 PTPREP23469 700 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 TNFRSF8P28908 595 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 PRPHP41219 470 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 KRT83P78385 493 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 UBXN1Q04323 297 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 EPHA10Q5JZY3 1008 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 ZMYM1Q5SVZ6 1142 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 NFRKBQ6P4R8 1299 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 MB21D2Q8IYB1 491 aaPredicted RBP14.23□□□□□ -0.13
HERC3-203ENST00000407637 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 MYH7P12883 1935 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 M0R2C6 588 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 TRAPPC3O43617 180 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 TMOD1P28289 359 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 TTF1Q15361 905 aaPredicted RBP14.23□□□□□ -0.13
HERC3-203ENST00000407637 TBC1D25Q3MII6 688 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 KANK3Q6NY19 840 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 ZNF572Q7Z3I7 529 aaPredicted RBP14.23□□□□□ -0.13
HERC3-203ENST00000407637 TRIM58Q8NG06 486 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 IFT81Q8WYA0 676 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 CCT6BQ92526 530 aa14.23□□□□□ -0.13
HERC3-203ENST00000407637 CORO1CQ9ULV4 474 aaPredicted RBP14.23□□□□□ -0.13
HERC3-203ENST00000407637 CLTAP09496 248 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 LINGO3P0C6S8 592 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 TOB1P50616 345 aaPredicted RBP14.22□□□□□ -0.13
HERC3-203ENST00000407637 CYP27A1Q02318 531 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 PDCD2Q16342 344 aaPredicted RBP14.22□□□□□ -0.13
HERC3-203ENST00000407637 PNMA8AQ86V59 439 aaPredicted RBP14.22□□□□□ -0.13
HERC3-203ENST00000407637 CD302Q8IX05 232 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 CAPN6Q9Y6Q1 641 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 ACEP12821 1306 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 A0A087X0B3 334 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 ERICH2A1L162 156 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 HOXB7P09629 217 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 ITIH3Q06033 890 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 TRIM29Q14134 588 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 DNAJC7Q99615 494 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 RBM12Q9NTZ6 932 aaKnown RBP14.22□□□□□ -0.13
HERC3-203ENST00000407637 PAG1Q9NWQ8 432 aa14.22□□□□□ -0.13
HERC3-203ENST00000407637 LUC7L2Q9Y383 392 aaKnown RBP14.22□□□□□ -0.13
HERC3-203ENST00000407637 UTYO14607 1347 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 WDR17Q8IZU2 1322 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 EIF4E1BA6NMX2 242 aaKnown RBP14.21□□□□□ -0.13
HERC3-203ENST00000407637 KCNJ18B7U540 433 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 SH2B2O14492 632 aaPredicted RBP14.21□□□□□ -0.13
HERC3-203ENST00000407637 PYGLP06737 847 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 GLI1P08151 1106 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
HERC3-203ENST00000407637 KCNJ12Q14500 433 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 CRELD2Q6UXH1 353 aaPredicted RBP14.21□□□□□ -0.13
HERC3-203ENST00000407637 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
HERC3-203ENST00000407637 CSRNP2Q9H175 543 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.13
HERC3-203ENST00000407637 PLAAQ9Y263 795 aa14.21□□□□□ -0.13
HERC3-203ENST00000407637 TTC36A6NLP5 189 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 DIAPH2O60879 1101 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 UPP2O95045 317 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 KIF4AO95239 1232 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 TCP11X2Q5H9J9 407 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 SLC30A9Q6PML9 568 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 ZNF662Q6ZS27 426 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 AGAP11Q8TF27 550 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 OSBPL9Q96SU4 736 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 SLC12A6Q9UHW9 1150 aa14.21□□□□□ -0.14
HERC3-203ENST00000407637 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 C5orf60A6NFR6 353 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 PES1O00541 588 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 PPIP5K2O43314 1243 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 AHCYL1O43865 530 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 FESP07332 822 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 MYBL1P10243 752 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 NOSTRINQ8IVI9 506 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 ARFGAP2Q8N6H7 521 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 CCDC63Q8NA47 563 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 DRAXINQ8NBI3 349 aaPredicted RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 L3MBTL3Q96JM7 780 aaPredicted RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 FAM167BQ9BTA0 163 aa14.2□□□□□ -0.14
HERC3-203ENST00000407637 NOP53Q9NZM5 478 aaKnown RBP14.2□□□□□ -0.14
HERC3-203ENST00000407637 LRRC10BA6NIK2 292 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms