RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CHST7Q9NS84 486 aa7.38□□□□□ -1.23
HMGB1P13-201ENST00000406019 STRIP2Q9ULQ0 834 aa7.38□□□□□ -1.23
HMGB1P13-201ENST00000406019 PCDHB12Q9Y5F1 795 aa7.38□□□□□ -1.23
HMGB1P13-201ENST00000406019 AFMP43652 599 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 CLEC16AQ2KHT3 1053 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 TIGD5Q53EQ6 642 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 SOGA3Q5TF21 947 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 CCDC120Q96HB5 630 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 FOXP3Q9BZS1 431 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 SUSD2Q9UGT4 822 aa7.37□□□□□ -1.23
HMGB1P13-201ENST00000406019 ZNF205O95201 554 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 HK2P52789 917 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 CHMP4BP1P59074 171 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 ZNF445P59923 1031 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 NR0B2Q15466 257 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 OGFOD2Q6N063 350 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 ZNF513Q8N8E2 541 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 PDZD8Q8NEN9 1154 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 KIRREL1Q96J84 757 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 CRBNQ96SW2 442 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 GP6Q9HCN6 339 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 TCFL5Q9UL49 500 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 ZNF451Q9Y4E5 1061 aa7.36□□□□□ -1.23
HMGB1P13-201ENST00000406019 BMP8BP34820 402 aa7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 CCDC144CPQ8IYA2 1237 aa7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 POU5F2Q8N7G0 328 aa7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 SHISA4Q96DD7 197 aa7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 KLHL25Q9H0H3 589 aa7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 PHAXQ9H814 394 aaKnown RBP7.35□□□□□ -1.23
HMGB1P13-201ENST00000406019 TLDC2A0PJX2 215 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 GLI1P08151 1106 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 SYPP08247 313 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 CD247P20963 164 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 TRHRP34981 398 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 RTP2Q5QGT7 225 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 CRTC3Q6UUV7 619 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 ZPBP2Q6X784 338 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 HAUS7Q99871 368 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 PIF1Q9H611 641 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 PCDHB10Q9UN67 800 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 FHOD1Q9Y613 1164 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 SLC12A7Q9Y666 1083 aa7.34□□□□□ -1.23
HMGB1P13-201ENST00000406019 STK10O94804 968 aaKnown RBP7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 TP53P04637 393 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 PCBP3P57721 371 aaKnown RBP7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 PMFBP1Q8TBY8 1022 aa7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 LIN37Q96GY3 246 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 MAP6Q96JE9 813 aa7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 HHIPL1Q96JK4 782 aa7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 FBXL21Q9UKT6 434 aa7.33□□□□□ -1.24
HMGB1P13-201ENST00000406019 H0Y8X5 98 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 VAV1P15498 845 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 SLC12A9Q9BXP2 914 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 RNF32Q9H0A6 362 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 OSBPL2Q9H1P3 480 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 FAM86C1Q9NVL1 165 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 TBX22Q9Y458 520 aa7.32□□□□□ -1.24
HMGB1P13-201ENST00000406019 A0A087WZG4 1122 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 FITM1A5D6W6 292 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 MEIS1O00470 390 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 GSNP06396 782 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 WAPLQ7Z5K2 1190 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 ANKS4BQ8N8V4 417 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 TMEM52Q8NDY8 209 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 ABHD4Q8TB40 342 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 ANAPC16Q96DE5 110 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 C19orf44Q9H6X5 657 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 ZSWIM4Q9H7M6 989 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 ERVK13-1Q9NX77 482 aa7.31□□□□□ -1.24
HMGB1P13-201ENST00000406019 SMAD7O15105 426 aaKnown RBP7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 FKTNO75072 461 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 EPHX1P07099 455 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 ETFBP38117 255 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 SLC7A5Q01650 507 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 CHRNEQ04844 493 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 DUSP4Q13115 394 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 GNPTABQ3T906 1256 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 NLRX1Q86UT6 975 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 LILRA2Q8N149 483 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 FIBCD1Q8N539 461 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 CPLX3Q8WVH0 158 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 BRF1Q92994 677 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 FCRL2Q96LA5 508 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
HMGB1P13-201ENST00000406019 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 USP2O75604 605 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 RAC2P15153 192 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 RPL10P27635 214 aaKnown RBP7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 TXKP42681 527 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 KIR2DL1P43626 348 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 KIR2DL2P43627 348 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 SERINC3Q13530 473 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 TMEM67Q5HYA8 995 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms