RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 ERFEQ4G0M1 354 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 SMAP1Q8IYB5 467 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 CPXCR1Q8N123 301 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 GPR152Q8TDT2 470 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 TIFAQ96CG3 184 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 CCDC8Q9H0W5 538 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 RSPH9Q9H1X1 276 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 USP25Q9UHP3 1055 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 UTRNP46939 3433 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 GOLGA6CA6NDK9 693 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GOLGA6BA6NDN3 693 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GSG1L2A8MUP6 293 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 APAF1O14727 1248 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 AXIN1O15169 862 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 PIP5K1CO60331 668 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 TNFRSF21O75509 655 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GJB6O95452 261 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 ZNF853P0CG23 659 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GOLGA6DP0CG33 693 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GYS1P13807 737 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 TRIM27P14373 513 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GARTP22102 1010 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 RRM1P23921 792 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 POLD1P28340 1107 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 IL6STP40189 918 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 CRKP46108 304 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 TERF1P54274 439 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GEMIN4P57678 1058 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 EIF4A1P60842 406 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 PURAQ00577 322 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 FOXK2Q01167 660 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 CBX2Q14781 532 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 SETDB1Q15047 1291 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 LONRF1Q17RB8 773 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 CCDC93Q567U6 631 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 WWC2Q6AWC2 1192 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 PRPF40BQ6NWY9 871 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 CC2D1AQ6P1N0 951 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 SMIM5Q71RC9 77 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 SH3RF1Q7Z6J0 888 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 STRA8Q7Z7C7 330 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 SLC9A9Q8IVB4 645 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 SUGP1Q8IWZ8 645 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 TTC30BQ8N4P2 665 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 VPS37AQ8NEZ2 397 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 RHOVQ96L33 236 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 NUDT12Q9BQG2 462 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 THUMPD2Q9BTF0 503 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 BCO2Q9BYV7 579 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 TNKS2Q9H2K2 1166 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 KCNQ5Q9NR82 932 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 TOR4AQ9NXH8 423 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 OBP2AQ9NY56 170 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 GOLGA6AQ9NYA3 693 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 ZMYM5Q9UJ78 669 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 FOXD3Q9UJU5 478 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 ZBTB1Q9Y2K1 713 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 USP16Q9Y5T5 823 aa6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 USP42Q9H9J4 1324 aaKnown RBP6.46□□□□□ -1.38
HMGB3P7-201ENST00000400214 COL15A1P39059 1388 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 N4BP2Q86UW6 1770 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 DLEC1Q9Y238 1755 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 VSTM5A8MXK1 200 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 PRRT4C9JH25 899 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 TERTO14746 1132 aaKnown RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 ACTN4O43707 911 aaKnown RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 GREM1O60565 184 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 NBPF7P0C2Y1 421 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 EPB42P16452 691 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 PCSK2P16519 638 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 RFC4P35249 363 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 HALP42357 657 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 CASP2P42575 452 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 HTR3AP46098 478 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 PPM1FP49593 454 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 EIF6P56537 245 aaKnown RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 CCDC85BQ15834 202 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 NGEFQ8N5V2 710 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 ZSWIM2Q8NEG5 633 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 RIN3Q8TB24 985 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 NKD1Q969G9 470 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 YIPF4Q9BSR8 244 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 SYT17Q9BSW7 474 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 SRCIN1Q9C0H9 1055 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 MIS18AQ9NYP9 233 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 NARFQ9UHQ1 456 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 PUF60Q9UHX1 559 aaKnown RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 ZNF180Q9UJW8 692 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 GTF2A1LQ9UNN4 478 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 FRMD4BQ9Y2L6 1034 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 RRP7AQ9Y3A4 280 aaKnown RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 ARFGEF1Q9Y6D6 1849 aa6.45□□□□□ -1.38
HMGB3P7-201ENST00000400214 ANKRD36CQ5JPF3 1778 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms