RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SYKP43405 635 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 CCDC96Q2M329 555 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 TMEM179Q6ZVK1 233 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 MIGA2Q7L4E1 593 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 COA7Q96BR5 231 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 CSRNP2Q9H175 543 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 NYAP2Q9P242 653 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 SEC63Q9UGP8 760 aaKnown RBP21.81■■□□□ 1.08
CLDND1-203ENST00000394181 NOL7Q9UMY1 257 aaKnown RBP21.81■■□□□ 1.08
CLDND1-203ENST00000394181 SRPRBQ9Y5M8 271 aaKnown RBP21.81■■□□□ 1.08
CLDND1-203ENST00000394181 FAM237AA0A1B0GTK4 181 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 ICA1Q05084 483 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 PPP1R9BQ96SB3 815 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 DNAJC25Q9H1X3 360 aa21.81■■□□□ 1.08
CLDND1-203ENST00000394181 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.81■■□□□ 1.08
CLDND1-203ENST00000394181 SMCO2A6NFE2 343 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 PPP1R11O60927 126 aaPredicted RBP21.8■■□□□ 1.08
CLDND1-203ENST00000394181 MCM7P33993 719 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 ZMYND12Q9H0C1 365 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 KCNH3Q9ULD8 1083 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 CEP131Q9UPN4 1083 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 USP17L10C9JJH3 530 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 PTGDRQ13258 359 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 TNIP1Q15025 636 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 LONRF3Q496Y0 759 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 DAGLBQ8NCG7 672 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 CCDC148Q8NFR7 591 aa21.8■■□□□ 1.08
CLDND1-203ENST00000394181 NUP88Q99567 741 aaPredicted RBP21.8■■□□□ 1.08
CLDND1-203ENST00000394181 COL2A1P02458 1487 aaPredicted RBP21.79■■□□□ 1.08
CLDND1-203ENST00000394181 A0A1W2PRG0 241 aa21.79■■□□□ 1.08
CLDND1-203ENST00000394181 SLFN13Q68D06 897 aa21.79■■□□□ 1.08
CLDND1-203ENST00000394181 LUZP1Q86V48 1076 aa21.79■■□□□ 1.08
CLDND1-203ENST00000394181 ANP32BQ92688 251 aaKnown RBP21.79■■□□□ 1.08
CLDND1-203ENST00000394181 PGAP2Q9UHJ9 254 aa21.79■■□□□ 1.08
CLDND1-203ENST00000394181 GJA3Q9Y6H8 435 aa21.79■■□□□ 1.08
CLDND1-203ENST00000394181 MYH4Q9Y623 1939 aa21.79■■□□□ 1.08
CLDND1-203ENST00000394181 ASTN2O75129 1339 aaPredicted RBP21.79■■□□□ 1.08
CLDND1-203ENST00000394181 AP5Z1O43299 807 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 CCDC173Q0VFZ6 552 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 CBX8Q9HC52 389 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 HERC5Q9UII4 1024 aaKnown RBP21.78■■□□□ 1.08
CLDND1-203ENST00000394181 GMPSP49915 693 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-203ENST00000394181 IL17AQ16552 155 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 INF2Q27J81 1249 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 C11orf57Q6ZUT1 292 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-203ENST00000394181 SAMD7Q7Z3H4 446 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 USP25Q9UHP3 1055 aa21.78■■□□□ 1.08
CLDND1-203ENST00000394181 F5H6K3 240 aa21.77■■□□□ 1.08
CLDND1-203ENST00000394181 SLC1A4P43007 532 aa21.77■■□□□ 1.08
CLDND1-203ENST00000394181 KLRC3Q07444 240 aa21.77■■□□□ 1.08
CLDND1-203ENST00000394181 FAM200AQ8TCP9 573 aa21.77■■□□□ 1.08
CLDND1-203ENST00000394181 EPSTI1Q96J88 318 aa21.77■■□□□ 1.08
CLDND1-203ENST00000394181 KIAA1468Q9P260 1216 aa21.77■■□□□ 1.08
CLDND1-203ENST00000394181 CCDC194A0A1B0GVG4 234 aa21.77■■□□□ 1.07
CLDND1-203ENST00000394181 ZNF280AP59817 542 aaPredicted RBP21.77■■□□□ 1.07
CLDND1-203ENST00000394181 ATP2C1P98194 919 aaPredicted RBP21.77■■□□□ 1.07
CLDND1-203ENST00000394181 UVSSAQ2YD98 709 aa21.77■■□□□ 1.07
CLDND1-203ENST00000394181 GPATCH4Q5T3I0 446 aaKnown RBP21.77■■□□□ 1.07
CLDND1-203ENST00000394181 ZNF579Q8NAF0 562 aaKnown RBP21.77■■□□□ 1.07
CLDND1-203ENST00000394181 PDLIM2Q96JY6 352 aa21.77■■□□□ 1.07
CLDND1-203ENST00000394181 TMEM260Q9NX78 707 aa21.77■■□□□ 1.07
CLDND1-203ENST00000394181 LTBP3Q9NS15 1303 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 FZD9O00144 591 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 FOXN1O15353 648 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 ECE1P42892 770 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 TRAPPC10P48553 1259 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 FKBP1CQ5VVH2 108 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 GALNT17Q6IS24 598 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 C4orf32Q8N8J7 132 aa21.76■■□□□ 1.07
CLDND1-203ENST00000394181 BIN2Q9UBW5 565 aaPredicted RBP21.76■■□□□ 1.07
CLDND1-203ENST00000394181 POLR2DO15514 142 aaKnown RBP21.75■■□□□ 1.07
CLDND1-203ENST00000394181 MYO1BO43795 1136 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 SNAP25P60880 206 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 MICALL2Q8IY33 904 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 PDILTQ8N807 584 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 ACER1Q8TDN7 264 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 ZNF541Q9H0D2 1346 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 A0A087X0B3 334 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 PNMA6FA0A0J9YX94 578 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 VWA3AA6NCI4 1184 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 BIN1O00499 593 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 NDUFB10O96000 172 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 TBC1D10BQ4KMP7 808 aaPredicted RBP21.75■■□□□ 1.07
CLDND1-203ENST00000394181 KIAA1755Q5JYT7 1200 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 PPP4R3BQ5MIZ7 849 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 FAM83AQ86UY5 434 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 SPICE1Q8N0Z3 855 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 TIGD1Q96MW7 591 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 C6orf50Q9HD87 102 aa21.75■■□□□ 1.07
CLDND1-203ENST00000394181 ZNF165P49910 485 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 PNOCQ13519 176 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 RASA3Q14644 834 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 JAKMIP3Q5VZ66 844 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 ISM2Q6H9L7 571 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 KRBA2Q6ZNG9 492 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 MTMR8Q96EF0 704 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 CCDC12Q8WUD4 166 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-203ENST00000394181 DCAF4Q8WV16 495 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 FAM13BQ9NYF5 915 aa21.74■■□□□ 1.07
CLDND1-203ENST00000394181 CNOT7Q9UIV1 285 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms