RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 MEIS2O14770 477 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 ECE1P42892 770 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 TC2NQ8N9U0 490 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 TEPSINQ96N21 525 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 NUP88Q99567 741 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 SLC16A2P36021 539 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 BICD2Q8TD16 824 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 ESR2Q92731 530 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 COA7Q96BR5 231 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 CFAP45Q9UL16 551 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 GDAQ9Y2T3 454 aa9.73□□□□□ -0.85
GAPVD1-204ENST00000394083 TRIM49BA6NDI0 452 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 EPHB6O15197 1021 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 BBOX1O75936 387 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 PDILTQ8N807 584 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 PIGSQ96S52 555 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 IRX2Q9BZI1 471 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 BLZF1Q9H2G9 400 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 GGA1Q9UJY5 639 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 REXO2Q9Y3B8 237 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 DDAH1O94760 285 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 ZDHHC15Q96MV8 337 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 DUSP9Q99956 384 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 PCDHA2Q9Y5H9 948 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 SSRP1Q08945 709 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 NOLC1Q14978 699 aaKnown RBP eCLIP9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 POTEDQ86YR6 584 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 REXO1L1PQ8IX06 675 aa9.72□□□□□ -0.85
GAPVD1-204ENST00000394083 TDP2O95551 362 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 PTMSP20962 102 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 ATL3Q6DD88 541 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 ZNF579Q8NAF0 562 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 TIGD1Q96MW7 591 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 FRYLO94915 3013 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 NFKBIEO00221 500 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 CCDC192P0DO97 292 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 NLRP12P59046 1061 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 KCTD19Q17RG1 926 aaPredicted RBP9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.85
GAPVD1-204ENST00000394083 PHF20L1A8MW92 1017 aa9.71□□□□□ -0.86
GAPVD1-204ENST00000394083 KLK7P49862 253 aa9.71□□□□□ -0.86
GAPVD1-204ENST00000394083 MRFAP1L1Q96HT8 127 aa9.71□□□□□ -0.86
GAPVD1-204ENST00000394083 DOCK3Q8IZD9 2030 aa9.71□□□□□ -0.86
GAPVD1-204ENST00000394083 KARSQ15046 597 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-204ENST00000394083 IGSF22Q8N9C0 903 aa9.71□□□□□ -0.86
GAPVD1-204ENST00000394083 GTF2F1P35269 517 aaKnown RBP eCLIP9.7□□□□□ -0.865e-6■■■■□ 24.4
GAPVD1-204ENST00000394083 INF2Q27J81 1249 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 KIAA0825Q8IV33 1275 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 DAGLBQ8NCG7 672 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 KCND1Q9NSA2 647 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 PTGER2P43116 358 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 APBA1Q02410 837 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 NR1I3Q14994 352 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 CCDC93Q567U6 631 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 EYA3Q99504 573 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 KBTBD4Q9NVX7 518 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ECE2O60344 883 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 SPP2Q13103 211 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 WDR66Q8TBY9 1149 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 TTYH3Q9C0H2 523 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ZNF638Q14966 1978 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ASTN1O14525 1302 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 CCDC69A6NI79 296 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 USP17L10C9JJH3 530 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 CDC25BP30305 580 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ADGRF4Q8IZF3 695 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 IFNKQ9P0W0 207 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ATP6V1DQ9Y5K8 247 aa9.7□□□□□ -0.86
GAPVD1-204ENST00000394083 ZNF536O15090 1300 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 CTIFO43310 598 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 PEX10O60683 326 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 CRKP46108 304 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 PICALMQ13492 652 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 UBE2SQ16763 222 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 ELOA2Q8IYF1 753 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 ACER1Q8TDN7 264 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 ZBTB39O15060 712 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 CUTAO60888 179 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 SYKP43405 635 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 FXR1P51114 621 aaKnown RBP eCLIP9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 GRB10Q13322 594 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 ARSHQ5FYA8 562 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 MIIPQ5JXC2 388 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 SCARA3Q6AZY7 606 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 WDR59Q6PJI9 974 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 SPZ1Q9BXG8 430 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 IDI2Q9BXS1 227 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 TDRD3Q9H7E2 651 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 ZNF446Q9NWS9 450 aa9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-204ENST00000394083 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms