RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 LCA5Q86VQ0 697 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 BANK1Q8NDB2 785 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 LRRC8CQ8TDW0 803 aa16.12■□□□□ 0.17
CCDC50-201ENST00000392455 FAM95CA0A1B0GW59 222 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 C16orf72Q14CZ0 275 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 VPS37BQ9H9H4 285 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 STK38LQ9Y2H1 464 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 DUOX2Q9NRD8 1548 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 PSMA4P25789 261 aaKnown RBP16.11■□□□□ 0.17
CCDC50-201ENST00000392455 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
CCDC50-201ENST00000392455 GRAMD4Q6IC98 578 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 KRT80Q6KB66 452 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 GSTA4O15217 222 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 GPC4O75487 556 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
CCDC50-201ENST00000392455 TMEM232C9JQI7 657 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
CCDC50-201ENST00000392455 ATICP31939 592 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 PPP2R5CQ13362 524 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 ST13P4Q8IZP2 240 aaPredicted RBP16.11■□□□□ 0.17
CCDC50-201ENST00000392455 FBXL13Q8NEE6 735 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 SCYL1Q96KG9 808 aa16.11■□□□□ 0.17
CCDC50-201ENST00000392455 PLCH2O75038 1416 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 IFIH1Q9BYX4 1025 aaKnown RBP16.1■□□□□ 0.17
CCDC50-201ENST00000392455 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
CCDC50-201ENST00000392455 OTUD6AQ7L8S5 288 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 KRT87PA6NCN2 255 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 CTNNA1P35221 906 aaKnown RBP16.1■□□□□ 0.17
CCDC50-201ENST00000392455 RAD51AP2Q09MP3 1159 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 ELMSAN1Q6PJG2 1045 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 MAST3O60307 1309 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
CCDC50-201ENST00000392455 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 GNPATO15228 680 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 MBD4O95243 580 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
CCDC50-201ENST00000392455 SKOR1P84550 965 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 SFMBT2Q5VUG0 894 aa16.1■□□□□ 0.17
CCDC50-201ENST00000392455 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 FLOT2Q14254 428 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TBCCQ15814 346 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TEX9Q8N6V9 391 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 LZICQ8WZA0 190 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 PALMDQ9NP74 551 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 DENND2AQ9ULE3 1009 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 SPDYE16A6NNV3 312 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TMCC1O94876 653 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TEDDM1Q5T9Z0 273 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 KLC3Q6P597 504 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 OTUB1Q96FW1 271 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 NPR1P16066 1061 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TTC19Q6DKK2 380 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 ECE1P42892 770 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 GLE1Q53GS7 698 aaKnown RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 TRIM11Q96F44 468 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 CNOT10Q9H9A5 744 aaKnown RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 EEF1B2P24534 225 aaKnown RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 ZNF263O14978 683 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 STAM2O75886 525 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 APOA1P02647 267 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 OCM2P0CE71 109 aa16.09■□□□□ 0.17
CCDC50-201ENST00000392455 OCMP0CE72 109 aaPredicted RBP16.09■□□□□ 0.17
CCDC50-201ENST00000392455 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.17
CCDC50-201ENST00000392455 RASGRF2O14827 1237 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 PAK1Q13153 545 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 POMGNT1Q8WZA1 660 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 PTPREP23469 700 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 PSMD7P51665 324 aa16.08■□□□□ 0.17
CCDC50-201ENST00000392455 GOLGA8RI6L899 631 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 CHEK2O96017 543 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 ARHGAP26Q9UNA1 814 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 UHRF1BP1LA0JNW5 1464 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 SUFUQ9UMX1 484 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 CCDC159P0C7I6 412 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 LINS1Q8NG48 757 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
CCDC50-201ENST00000392455 GSNP06396 782 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 IGBP1P78318 339 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 NME8Q8N427 588 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 FAM96AQ9H5X1 160 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 UFL1O94874 794 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 TRIM8Q9BZR9 551 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms