RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PCCAP05165 728 aaPredicted RBP21.74■■□□□ 1.07
SHANK1-203ENST00000391813 VSTM4Q8IW00 320 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 MAIP1Q8WWC4 291 aa21.74■■□□□ 1.07
SHANK1-203ENST00000391813 FAM207AQ9NSI2 230 aaPredicted RBP21.74■■□□□ 1.07
SHANK1-203ENST00000391813 KMT5BQ4FZB7 885 aa21.73■■□□□ 1.07
SHANK1-203ENST00000391813 GSDMAQ96QA5 445 aa21.73■■□□□ 1.07
SHANK1-203ENST00000391813 RNF14Q9UBS8 474 aa21.73■■□□□ 1.07
SHANK1-203ENST00000391813 SUCLG2Q96I99 432 aa21.73■■□□□ 1.07
SHANK1-203ENST00000391813 TNS3Q68CZ2 1445 aa21.73■■□□□ 1.07
SHANK1-203ENST00000391813 DIP2CQ9Y2E4 1556 aa21.73■■□□□ 1.07
SHANK1-203ENST00000391813 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 ALS2CLQ60I27 953 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 TMC4Q7Z404 712 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 JPH2Q9BR39 696 aaPredicted RBP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 FAM184BQ9ULE4 1060 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 IRX4P78413 519 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 ZBTB38Q8NAP3 1195 aaPredicted RBP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 KIFAP3Q92845 792 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 AMFRQ9UKV5 643 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 AFF2P51816 1311 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 CHUKO15111 745 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 TROVE2P10155 538 aaKnown RBP eCLIP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 CCDC105Q8IYK2 499 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 MIGA1Q8NAN2 632 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 CASQ2O14958 399 aaPredicted RBP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 HGSO14964 777 aaPredicted RBP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 GNA14O95837 355 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 GAS8O95995 478 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 CASP14P31944 242 aa21.72■■□□□ 1.07
SHANK1-203ENST00000391813 CC2D1AQ6P1N0 951 aaPredicted RBP21.72■■□□□ 1.07
SHANK1-203ENST00000391813 ARID4AP29374 1257 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-203ENST00000391813 SUN1O94901 812 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 ADCK5Q3MIX3 580 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 FNBP4Q8N3X1 1017 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-203ENST00000391813 ASAP1Q9ULH1 1129 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 ALKQ9UM73 1620 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 KCNJ14Q9UNX9 436 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 EIF3CLB5ME19 914 aaKnown RBP21.71■■□□□ 1.07
SHANK1-203ENST00000391813 GTPBP6O43824 516 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-203ENST00000391813 CALUO43852 315 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-203ENST00000391813 CTSWP56202 376 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 SLMAPQ14BN4 828 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 RETREG2Q8NC44 543 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 EIF3CQ99613 913 aaKnown RBP21.71■■□□□ 1.07
SHANK1-203ENST00000391813 CDC42BPBQ9Y5S2 1711 aa21.71■■□□□ 1.07
SHANK1-203ENST00000391813 KRIT1O00522 736 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 ATP2B4P23634 1241 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 XAGE2Q96GT9 111 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 CTTNBP2NLQ9P2B4 639 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 CDK12Q9NYV4 1490 aaPredicted RBP21.7■■□□□ 1.06
SHANK1-203ENST00000391813 SPDYE3A6NKU9 549 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 ENOX1Q8TC92 643 aaKnown RBP21.7■■□□□ 1.06
SHANK1-203ENST00000391813 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 KDRP35968 1356 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 COPB1P53618 953 aaKnown RBP21.7■■□□□ 1.06
SHANK1-203ENST00000391813 KRT25Q7Z3Z0 450 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 PANX2Q96RD6 677 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 CLTCL1P53675 1640 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 KCNK3O14649 394 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 KRT15P19012 456 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 GUCY2DQ02846 1103 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 SCRN1Q12765 414 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 ZNF827Q17R98 1081 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 MSANTD4Q8NCY6 345 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 KLHDC4Q8TBB5 520 aa21.7■■□□□ 1.06
SHANK1-203ENST00000391813 APBB1IPQ7Z5R6 666 aaPredicted RBP21.69■■□□□ 1.06
SHANK1-203ENST00000391813 STAMQ92783 540 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 ABCB6Q9NP58 842 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 CLIC4Q9Y696 253 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 PDIA3P30101 505 aaKnown RBP21.69■■□□□ 1.06
SHANK1-203ENST00000391813 SLC4A8Q2Y0W8 1093 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 HAUS3Q68CZ6 603 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 KCTD16Q68DU8 428 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 TRIM68Q6AZZ1 485 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 BLZF1Q9H2G9 400 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 ZKSCAN8Q15776 578 aaPredicted RBP21.69■■□□□ 1.06
SHANK1-203ENST00000391813 PLEKHF1Q96S99 279 aa21.69■■□□□ 1.06
SHANK1-203ENST00000391813 ADCY9O60503 1353 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 KCNQ3O43525 872 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 EAF2Q96CJ1 260 aaPredicted RBP21.68■■□□□ 1.06
SHANK1-203ENST00000391813 LRWD1Q9UFC0 647 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 ZMYM6O95789 1325 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 PPIP5K2O43314 1243 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 EVI5O60447 810 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 SDCCAG8Q86SQ7 713 aaPredicted RBP21.68■■□□□ 1.06
SHANK1-203ENST00000391813 USPL1Q5W0Q7 1092 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 LINC00301Q8NCQ3 95 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 P3H4Q92791 437 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 TRIM4Q9C037 500 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 OSBPL5Q9H0X9 879 aaPredicted RBP21.68■■□□□ 1.06
SHANK1-203ENST00000391813 BCAP29Q9UHQ4 241 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 NONOQ15233 471 aaKnown RBP eCLIP21.68■■□□□ 1.06
SHANK1-203ENST00000391813 GPR162Q16538 588 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 MAP3K21Q5TCX8 1036 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 PLA2G4DQ86XP0 818 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 NLRC4Q9NPP4 1024 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 FAM114A2Q9NRY5 505 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 SPATA31A6Q5VVP1 1343 aa21.68■■□□□ 1.06
SHANK1-203ENST00000391813 TAF5LO75529 589 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 N4BP2L2Q92802 583 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms