RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZNF205O95201 554 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 MED14OSP0DP75 135 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 IMPDH2P12268 514 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 PMS1P54277 932 aaKnown RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 HDLBPQ00341 1268 aaKnown RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 TRIM26Q12899 539 aaPredicted RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 KIR3DS1Q14943 382 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 FBXW10Q5XX13 1052 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 DCAF15Q66K64 600 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 INTS3Q68E01 1043 aaKnown RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 CEP128Q6ZU80 1094 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 ZNF605Q86T29 641 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 LRRC56Q8IYG6 542 aaPredicted RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 C7orf61Q8IZ16 206 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 PLCD4Q9BRC7 762 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 MCOLN1Q9GZU1 580 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 GINM1Q9NU53 330 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 FAM86C1Q9NVL1 165 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 ERVK13-1Q9NX77 482 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 KIAA1522Q9P206 1035 aaPredicted RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 FBXL21Q9UKT6 434 aa5.84□□□□□ -1.47
TRAV40-201ENST00000390467 GPR55Q9Y2T6 319 aaPredicted RBP5.84□□□□□ -1.47
TRAV40-201ENST00000390467 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 UNCXA6NJT0 531 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 NFIBO00712 420 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 NRDCO43847 1150 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 BMP8BP34820 402 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 KIR2DL1P43626 348 aaPredicted RBP5.83□□□□□ -1.48
TRAV40-201ENST00000390467 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
TRAV40-201ENST00000390467 SNX17Q15036 470 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 AXDND1Q5T1B0 1012 aaPredicted RBP5.83□□□□□ -1.48
TRAV40-201ENST00000390467 C9orf131Q5VYM1 1079 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 UNC5AQ6ZN44 842 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 ATG14Q6ZNE5 492 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 CCDC144CPQ8IYA2 1237 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 ZNF654Q8IZM8 581 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 RBBP8NLQ8NC74 664 aaPredicted RBP5.83□□□□□ -1.48
TRAV40-201ENST00000390467 FCRL2Q96LA5 508 aaPredicted RBP5.83□□□□□ -1.48
TRAV40-201ENST00000390467 SLC26A8Q96RN1 970 aa5.83□□□□□ -1.48
TRAV40-201ENST00000390467 FADS2P1A8MWK0 482 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 SDHBP21912 280 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 GLDCP23378 1020 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 GUCY2CP25092 1073 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 PDE6BP35913 854 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 RTP2Q5QGT7 225 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 ADGRF1Q5T601 910 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 ANKLE2Q86XL3 938 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 MRRFQ96E11 262 aaKnown RBP5.82□□□□□ -1.48
TRAV40-201ENST00000390467 DHRS1Q96LJ7 313 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 TOX2Q96NM4 488 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 CDADC1Q9BWV3 514 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 AP5S1Q9NUS5 200 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 PRR13Q9NZ81 148 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 EFR3BQ9Y2G0 817 aa5.82□□□□□ -1.48
TRAV40-201ENST00000390467 LTBP3Q9NS15 1303 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 H0Y8X5 98 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 TP53P04637 393 aaPredicted RBP5.81□□□□□ -1.48
TRAV40-201ENST00000390467 TMEM253P0C7T8 217 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 VAV1P15498 845 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 SOX9P48436 509 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 HSF5Q4G112 596 aaPredicted RBP5.81□□□□□ -1.48
TRAV40-201ENST00000390467 NT5DC4Q86YG4 428 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 ZNF552Q9H707 407 aaPredicted RBP5.81□□□□□ -1.48
TRAV40-201ENST00000390467 GCM1Q9NP62 436 aa5.81□□□□□ -1.48
TRAV40-201ENST00000390467 SMG5Q9UPR3 1016 aaKnown RBP5.81□□□□□ -1.48
TRAV40-201ENST00000390467 TCAF2A6NFQ2 919 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 RTP1P59025 263 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 ZNF445P59923 1031 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 DLG4P78352 724 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 KCNA10Q16322 511 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 SLCO6A1Q86UG4 719 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 KCNN1Q92952 543 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 BRF1Q92994 677 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 GPRASP2Q96D09 838 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 DSCC1Q9BVC3 393 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 SGPP1Q9BX95 441 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 GP6Q9HCN6 339 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 TNFRSF10DQ9UBN6 386 aa5.8□□□□□ -1.48
TRAV40-201ENST00000390467 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
TRAV40-201ENST00000390467 OR14I1A6ND48 311 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 CBFA2T2O43439 604 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 PEX10O60683 326 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 GSNP06396 782 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 LINC00310P59036 64 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 TMEM52Q8NDY8 209 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 RASGRP4Q8TDF6 673 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
TRAV40-201ENST00000390467 SLC12A9Q9BXP2 914 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 CRTAC1Q9NQ79 661 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.79□□□□□ -1.48
TRAV40-201ENST00000390467 ZNF451Q9Y4E5 1061 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
TRAV40-201ENST00000390467 TEX51A0A1B0GUA7 166 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 SEMA7AO75326 666 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms