RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 DDX12PQ92771 950 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 TEKT1Q969V4 418 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 STRBPQ96SI9 672 aaKnown RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 ARMCX3Q9UH62 379 aaPredicted RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 ACTN4O43707 911 aaKnown RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 SEC31AO94979 1220 aaKnown RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 CYP2J2P51589 502 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 PAK2Q13177 524 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 CCDC6Q16204 474 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 WDR44Q5JSH3 913 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 FAM26FQ5R3K3 315 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 TRIM58Q8NG06 486 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 KIFC2Q96AC6 838 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 NAP1L3Q99457 506 aaPredicted RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 IQGAP3Q86VI3 1631 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 CHGBP05060 677 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 XRCC5P13010 732 aaKnown RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 LONP1P36776 959 aaKnown RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 RBL2Q08999 1139 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 LARGE2Q8N3Y3 721 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 SAMD15Q9P1V8 674 aa18.99■□□□□ 0.63
SGCB-201ENST00000381431 UTP11Q9Y3A2 253 aaKnown RBP18.99■□□□□ 0.63
SGCB-201ENST00000381431 POLR2FP61218 127 aaKnown RBP18.98■□□□□ 0.63
SGCB-201ENST00000381431 CDC25BP30305 580 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 U2AF1L4Q8WU68 220 aaKnown RBP18.98■□□□□ 0.63
SGCB-201ENST00000381431 LRRC45Q96CN5 670 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 MPHOSPH6Q99547 160 aaKnown RBP18.98■□□□□ 0.63
SGCB-201ENST00000381431 MYO1AQ9UBC5 1043 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 TET3O43151 1660 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 LIFRP42702 1097 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 DIXDC1Q155Q3 683 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 ZSCAN26Q16670 478 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 FMNL3Q8IVF7 1028 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 GJA3Q9Y6H8 435 aa18.98■□□□□ 0.63
SGCB-201ENST00000381431 USP17L8P0C7I0 530 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 NF2P35240 595 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 ERFEQ4G0M1 354 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 FERMT1Q9BQL6 677 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 ASIC3Q9UHC3 531 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 KCNK3O14649 394 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 CDC23Q9UJX2 597 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 GAS7O60861 476 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 MXRA7P84157 204 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 DYNLL2Q96FJ2 89 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.97■□□□□ 0.63
SGCB-201ENST00000381431 ZCCHC11Q5TAX3 1644 aaKnown RBP18.97■□□□□ 0.63
SGCB-201ENST00000381431 ZMYND10O75800 440 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 CASP1P29466 404 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 STAT1P42224 750 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 LRRC41Q15345 812 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 KRT71Q3SY84 523 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 SUSD4Q5VX71 490 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 ZNF365Q70YC5 407 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 CNOT6LQ96LI5 555 aaKnown RBP18.97■□□□□ 0.63
SGCB-201ENST00000381431 USP21Q9UK80 565 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 PCDHA1Q9Y5I3 950 aa18.97■□□□□ 0.63
SGCB-201ENST00000381431 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 CCDC63Q8NA47 563 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 GJA10Q969M2 543 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 GINS2Q9Y248 185 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 CYP2E1P05181 493 aaPredicted RBP18.96■□□□□ 0.63
SGCB-201ENST00000381431 IRX5P78411 483 aaPredicted RBP18.96■□□□□ 0.63
SGCB-201ENST00000381431 PPFIA1Q13136 1202 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 ACRBPQ8NEB7 543 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 KIFAP3Q92845 792 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 ADAT2Q7Z6V5 191 aaKnown RBP18.96■□□□□ 0.63
SGCB-201ENST00000381431 TBC1D10CQ8IV04 446 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 TTC16Q8NEE8 873 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 USTQ9Y2C2 406 aa18.96■□□□□ 0.63
SGCB-201ENST00000381431 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.96■□□□□ 0.63
SGCB-201ENST00000381431 SOWAHDA6NJG2 315 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 H0YIN7 160 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 PRKG1Q13976 671 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 ENOX1Q8TC92 643 aaKnown RBP18.95■□□□□ 0.62
SGCB-201ENST00000381431 PDLIM2Q96JY6 352 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 PANK4Q9NVE7 773 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 ADAM9Q13443 819 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 UAP1Q16222 522 aaPredicted RBP18.95■□□□□ 0.62
SGCB-201ENST00000381431 UBL4BQ8N7F7 174 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 PSMD1Q99460 953 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 DDX25Q9UHL0 483 aaKnown RBP18.95■□□□□ 0.62
SGCB-201ENST00000381431 CCDC105Q8IYK2 499 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 RPGRIP1Q96KN7 1286 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 NUCKS1Q9H1E3 243 aaKnown RBP18.95■□□□□ 0.62
SGCB-201ENST00000381431 PDE11AQ9HCR9 933 aa18.95■□□□□ 0.62
SGCB-201ENST00000381431 USP17L2Q6R6M4 530 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.94■□□□□ 0.62
SGCB-201ENST00000381431 NKIRAS1Q9NYS0 192 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 KIAA1024Q9UPX6 916 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 A2ML1A8K2U0 1454 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 PLEKHA8P1O95397 391 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
SGCB-201ENST00000381431 CLEC17AQ6ZS10 378 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
SGCB-201ENST00000381431 RABGGTAQ92696 567 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 GOLPH3LQ9H4A5 285 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 PCP11498 1178 aaKnown RBP18.94■□□□□ 0.62
SGCB-201ENST00000381431 NAA30Q147X3 362 aaPredicted RBP18.94■□□□□ 0.62
SGCB-201ENST00000381431 C6orf163Q5TEZ5 329 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms