RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 LBHD1Q9BQE6 289 aaPredicted RBP20.09■□□□□ 0.81
SMN2-201ENST00000380741 NAPBQ9H115 298 aa20.09■□□□□ 0.81
SMN2-201ENST00000380741 PRKAG2Q9UGJ0 569 aa20.09■□□□□ 0.81
SMN2-201ENST00000380741 TTLL1O95922 423 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 ZNF865P0CJ78 1059 aaPredicted RBP20.08■□□□□ 0.81
SMN2-201ENST00000380741 RARBP10826 455 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.81
SMN2-201ENST00000380741 TRIM60Q495X7 471 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 Q7L0L9 218 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 DEFB123Q8N688 67 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 FERMT2Q96AC1 680 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 KIFC2Q96AC6 838 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 XPNPEP3Q9NQH7 507 aa20.08■□□□□ 0.81
SMN2-201ENST00000380741 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 ATP2A1O14983 1001 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 ZBED4O75132 1171 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 TSPY3P0CV98 308 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 TSPY8P0CW00 308 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 SLC4A3P48751 1232 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 PDE4BQ07343 736 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 PPARAQ07869 468 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 GMCL1P1Q8NEA9 526 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 SLC38A10Q9HBR0 1119 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 SYNPO2Q9UMS6 1093 aa20.07■□□□□ 0.8
SMN2-201ENST00000380741 MCM3APO60318 1980 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 PGK1P00558 417 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
SMN2-201ENST00000380741 AKR1A1P14550 325 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 TFAP4Q01664 338 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 LENG1Q96BZ8 264 aaPredicted RBP20.06■□□□□ 0.8
SMN2-201ENST00000380741 DDX11Q96FC9 970 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
SMN2-201ENST00000380741 PRDM5Q9NQX1 630 aaPredicted RBP20.06■□□□□ 0.8
SMN2-201ENST00000380741 FEM1BQ9UK73 627 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 PHF24Q9UPV7 400 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 CNPY2Q9Y2B0 182 aa20.06■□□□□ 0.8
SMN2-201ENST00000380741 CTDP1Q9Y5B0 961 aaPredicted RBP20.06■□□□□ 0.8
SMN2-201ENST00000380741 DNAJC25-GNG10A0A024R161 153 aa20.05■□□□□ 0.8
SMN2-201ENST00000380741 FOXP2O15409 715 aa20.05■□□□□ 0.8
SMN2-201ENST00000380741 SLFN13Q68D06 897 aa20.05■□□□□ 0.8
SMN2-201ENST00000380741 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
SMN2-201ENST00000380741 RNF180Q86T96 592 aa20.05■□□□□ 0.8
SMN2-201ENST00000380741 MSL3Q8N5Y2 521 aaKnown RBP20.05■□□□□ 0.8
SMN2-201ENST00000380741 A0A0C4DFX4 3053 aa20.05■□□□□ 0.8
SMN2-201ENST00000380741 SYNGAP1Q96PV0 1343 aa20.04■□□□□ 0.8
SMN2-201ENST00000380741 SNAI1O95863 264 aaPredicted RBP20.04■□□□□ 0.8
SMN2-201ENST00000380741 BMP3P12645 472 aa20.04■□□□□ 0.8
SMN2-201ENST00000380741 C1orf53Q5VUE5 145 aa20.04■□□□□ 0.8
SMN2-201ENST00000380741 MAMDC4Q6UXC1 1216 aa20.04■□□□□ 0.8
SMN2-201ENST00000380741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMN2-201ENST00000380741 CRBNQ96SW2 442 aa20.04■□□□□ 0.8
SMN2-201ENST00000380741 PDLIM7Q9NR12 457 aa20.04■□□□□ 0.8
SMN2-201ENST00000380741 ADAMTS4O75173 837 aa20.03■□□□□ 0.8
SMN2-201ENST00000380741 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
SMN2-201ENST00000380741 SH3RF1Q7Z6J0 888 aa20.03■□□□□ 0.8
SMN2-201ENST00000380741 ANKRD35Q8N283 1001 aa20.03■□□□□ 0.8
SMN2-201ENST00000380741 MTMR10Q9NXD2 777 aa20.03■□□□□ 0.8
SMN2-201ENST00000380741 A0A1W2PQ45 241 aaPredicted RBP20.02■□□□□ 0.8
SMN2-201ENST00000380741 A0A1W2PQY0 241 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 TMEM232C9JQI7 657 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 OAZ1P54368 228 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 TLE2Q04725 743 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 CTDSPL2Q05D32 466 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 ZNF467Q7Z7K2 595 aaPredicted RBP20.02■□□□□ 0.8
SMN2-201ENST00000380741 CHST13Q8NET6 341 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 BADQ92934 168 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 FGD4Q96M96 766 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 INCENPQ9NQS7 918 aa20.02■□□□□ 0.8
SMN2-201ENST00000380741 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.8
SMN2-201ENST00000380741 ZHX1Q9UKY1 873 aaPredicted RBP20.02■□□□□ 0.8
SMN2-201ENST00000380741 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
SMN2-201ENST00000380741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMN2-201ENST00000380741 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.79
SMN2-201ENST00000380741 CDH23Q9H251 3354 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 TRIM43BA6NCK2 446 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 STAT2P52630 851 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 SLC17A8Q8NDX2 589 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 TRIM43Q96BQ3 446 aaPredicted RBP20.01■□□□□ 0.79
SMN2-201ENST00000380741 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 EVI5LQ96CN4 794 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 GMCL1Q96IK5 515 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 HOMER2Q9NSB8 354 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 FBXO40Q9UH90 709 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 FAM184BQ9ULE4 1060 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 STX8Q9UNK0 236 aa20.01■□□□□ 0.79
SMN2-201ENST00000380741 UNC80Q8N2C7 3258 aa20■□□□□ 0.79
SMN2-201ENST00000380741 SLC1A4P43007 532 aa20■□□□□ 0.79
SMN2-201ENST00000380741 IL17RBQ9NRM6 502 aa20■□□□□ 0.79
SMN2-201ENST00000380741 CDKN2AIPQ9NXV6 580 aaPredicted RBP20■□□□□ 0.79
SMN2-201ENST00000380741 TACC3Q9Y6A5 838 aa20■□□□□ 0.79
SMN2-201ENST00000380741 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 NMT2O60551 498 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 FDX1P10109 184 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 MCCP23508 829 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 PDE1AP54750 535 aa19.99■□□□□ 0.79
SMN2-201ENST00000380741 IKQ13123 557 aaPredicted RBP19.99■□□□□ 0.79
SMN2-201ENST00000380741 HDAC1Q13547 482 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms