RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 DZIP1Q86YF9 867 aaKnown RBP12.35□□□□□ -0.43
BEST1-201ENST00000378043 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 GPR161Q8N6U8 529 aaKnown RBP12.35□□□□□ -0.43
BEST1-201ENST00000378043 SH3RF3Q8TEJ3 882 aaPredicted RBP12.35□□□□□ -0.43
BEST1-201ENST00000378043 LRRC15Q8TF66 581 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 PYM1Q9BRP8 204 aaKnown RBP12.35□□□□□ -0.43
BEST1-201ENST00000378043 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 ARGLU1Q9NWB6 273 aaPredicted RBP12.35□□□□□ -0.43
BEST1-201ENST00000378043 TAB2Q9NYJ8 693 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 CDK5RAP2Q96SN8 1893 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 SASH3O75995 380 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 TPM1P09493 284 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 GRM4Q14833 912 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 FAM98CQ17RN3 349 aaKnown RBP12.35□□□□□ -0.43
BEST1-201ENST00000378043 TEX35Q5T0J7 233 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 ABHD10Q9NUJ1 306 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 PCDHA6Q9UN73 950 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 PCDHA8Q9Y5H6 950 aa12.35□□□□□ -0.43
BEST1-201ENST00000378043 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 TBC1D8O95759 1140 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 PMS1P54277 932 aaKnown RBP12.34□□□□□ -0.43
BEST1-201ENST00000378043 KCNJ12Q14500 433 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 WWC2Q6AWC2 1192 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 CC2D1AQ6P1N0 951 aaPredicted RBP12.34□□□□□ -0.43
BEST1-201ENST00000378043 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
BEST1-201ENST00000378043 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 PARD6BQ9BYG5 372 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 TRIM49BA6NDI0 452 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 ZBTB22O15209 634 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 STAT6P42226 847 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
BEST1-201ENST00000378043 TPTE2Q6XPS3 522 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
BEST1-201ENST00000378043 KLRC4O43908 158 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 TFRCP02786 760 aaKnown RBP12.33□□□□□ -0.44
BEST1-201ENST00000378043 ADSSL1Q8N142 457 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 STXBP3O00186 592 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 USP5P45974 858 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 INF2Q27J81 1249 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
BEST1-201ENST00000378043 SPTY2D1Q68D10 685 aaPredicted RBP12.33□□□□□ -0.44
BEST1-201ENST00000378043 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 RMND1Q9NWS8 449 aa12.33□□□□□ -0.44
BEST1-201ENST00000378043 GNPATO15228 680 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 KIF5CO60282 957 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
BEST1-201ENST00000378043 SPAG1Q07617 926 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 NFIXQ14938 502 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 ZNF569Q5MCW4 686 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 DTHD1Q6ZMT9 781 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 DAGLBQ8NCG7 672 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 CDC23Q9UJX2 597 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 BTAF1O14981 1849 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 CCDC194A0A1B0GVG4 234 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
BEST1-201ENST00000378043 ZPR1O75312 459 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 PARP1P09874 1014 aaKnown RBP12.32□□□□□ -0.44
BEST1-201ENST00000378043 TXLNAP40222 546 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 CREBRFQ8IUR6 639 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 PLIN2Q99541 437 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 CHP1Q99653 195 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 CPVLQ9H3G5 476 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 MKNK2Q9HBH9 465 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 BARHL2Q9NY43 387 aa12.32□□□□□ -0.44
BEST1-201ENST00000378043 H7C1D1 291 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 RASA1P20936 1047 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 KRT9P35527 623 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 HEATR3Q7Z4Q2 680 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 SLC35F6Q8N357 371 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
BEST1-201ENST00000378043 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
BEST1-201ENST00000378043 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 TTF2Q9UNY4 1162 aaKnown RBP12.31□□□□□ -0.44
BEST1-201ENST00000378043 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 ATP8B1O43520 1251 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 TSPY3P0CV98 308 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 TSPY8P0CW00 308 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 PPP4CP60510 307 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 UBXN1Q04323 297 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 WDR66Q8TBY9 1149 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 ZNF507Q8TCN5 953 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms