RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ZNF233A6NK53 670 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 E7EVH7 732 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 KRT86O43790 486 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 RANBP6O60518 1105 aaKnown RBP22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 FAM107AO95990 144 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 OR8K1Q8NGG5 319 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 PCDHB6Q9Y5E3 794 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 NR1D1P20393 614 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 WDR59Q6PJI9 974 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 CCDC50Q8IVM0 306 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 EHBP1Q8NDI1 1231 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 SENP2Q9HC62 589 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 WDR17Q8IZU2 1322 aa22.97■■□□□ 1.27
TMEFF1-201ENST00000374879 NBPF26B4DH59 902 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 SH2B2O14492 632 aaPredicted RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 GBP2P32456 591 aaPredicted RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 MDH1P40925 334 aaKnown RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 IARSP41252 1262 aaKnown RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 ZKSCAN8Q15776 578 aaPredicted RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 NBPF10Q6P3W6 841 aaKnown RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 MICU3Q86XE3 530 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 NBPF15Q8N660 670 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 CAVIN3Q969G5 261 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 OSBPL7Q9BZF2 842 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 ACTR5Q9H9F9 607 aaPredicted RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 CPDO75976 1380 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 MACROD2A1Z1Q3 448 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 UBXN1Q04323 297 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 TTF1Q15361 905 aaPredicted RBP22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 SPATA4Q8NEY3 305 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 UBN2Q6ZU65 1347 aa22.96■■□□□ 1.27
TMEFF1-201ENST00000374879 ANO9A1A5B4 782 aa22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 EME2A4GXA9 379 aaPredicted RBP22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 H7C1W4 665 aa22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 OPLAHO14841 1288 aa22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 ATG9AQ7Z3C6 839 aa22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 ZNF579Q8NAF0 562 aaKnown RBP22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 PAGE5Q96GU1 130 aa22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 CCDC43Q96MW1 224 aaKnown RBP22.95■■□□□ 1.27
TMEFF1-201ENST00000374879 KLHL33A6NCF5 533 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 PPARDQ03181 441 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 TTLL7Q6ZT98 887 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 CYFIP2Q96F07 1278 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 SMARCAL1Q9NZC9 954 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 SRPRBQ9Y5M8 271 aaKnown RBP22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 KRT83P78385 493 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 NTRK3Q16288 839 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 IQCKQ8N0W5 287 aa22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 PPANQ9NQ55 473 aaKnown RBP22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 ANGEL1Q9UNK9 670 aaKnown RBP22.95■■□□□ 1.26
TMEFF1-201ENST00000374879 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 ACCSLQ4AC99 568 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 EMC10Q5UCC4 262 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 STIM2Q9P246 746 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 KCNJ14Q9UNX9 436 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 IFIT1P09914 478 aaKnown RBP22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 GCKP35557 465 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 WASHC4Q2M389 1173 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 TCP11X2Q5H9J9 407 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 CFAP58Q5T655 872 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 HAUS3Q68CZ6 603 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 FAM43BQ6ZT52 329 aaPredicted RBP22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 ARMC2Q8NEN0 867 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 RUBCNQ92622 972 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 EPSTI1Q96J88 318 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 CWC25Q9NXE8 425 aaPredicted RBP22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 SNX12Q9UMY4 172 aa22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 LUC7L2Q9Y383 392 aaKnown RBP22.94■■□□□ 1.26
TMEFF1-201ENST00000374879 KCNJ18B7U540 433 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 ZNF213O14771 459 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 KCNJ12Q14500 433 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 APOA5Q6Q788 366 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 ZNF662Q6ZS27 426 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 STAMQ92783 540 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 DNAJC7Q99615 494 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 MYL10Q9BUA6 226 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 SLC26A6Q9BXS9 759 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 GLI3P10071 1580 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 SLC8A1P32418 973 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 CYB5R4Q7L1T6 521 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 DIS3L2Q8IYB7 885 aaKnown RBP22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 EHD2Q9NZN4 543 aa22.93■■□□□ 1.26
TMEFF1-201ENST00000374879 FAM153BP0C7A2 387 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 FAM153CQ494X1 144 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 GRIPAP1Q4V328 841 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 ANKRD20A8PQ5CZ79 823 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 SH3RF1Q7Z6J0 888 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 SMCR8Q8TEV9 937 aaPredicted RBP22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 KIF9Q9HAQ2 790 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 FAM153AQ9UHL3 310 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 TNS3Q68CZ2 1445 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 MYO5AQ9Y4I1 1855 aaKnown RBP22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 GSDMAQ96QA5 445 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 LAMB4A4D0S4 1761 aa22.92■■□□□ 1.26
TMEFF1-201ENST00000374879 ECM29Q5VYK3 1845 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 GUCY1A2P33402 732 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 FNBP4Q8N3X1 1017 aaPredicted RBP22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 RASSF8Q8NHQ8 419 aa22.91■■□□□ 1.26
TMEFF1-201ENST00000374879 PIK3R5Q8WYR1 880 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms