RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ENOX1Q8TC92 643 aaKnown RBP18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 DACH1Q9UI36 760 aa18.14■□□□□ 0.49
CNKSR1-202ENST00000374253 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 CREBRFQ8IUR6 639 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 IQUBQ8NA54 791 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 FAM196BA6NMK8 535 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 ADKP55263 362 aaKnown RBP18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 LETM2Q2VYF4 491 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 PDXDC2PQ6P474 469 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 TRIML1Q8N9V2 468 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 COA1Q9GZY4 146 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 SH3GLB2Q9NR46 395 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 CTNND2Q9UQB3 1225 aa18.13■□□□□ 0.49
CNKSR1-202ENST00000374253 SYNRGQ9UMZ2 1314 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 SMCO2A6NFE2 343 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 NFIAQ12857 509 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 JAKMIP3Q5VZ66 844 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 NYAP1Q6ZVC0 841 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 CCDC34Q96HJ3 373 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 GPCPD1Q9NPB8 672 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 BIN2Q9UBW5 565 aaPredicted RBP18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 TEX33O43247 280 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 GTF2F1P35269 517 aaKnown RBP eCLIP18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 TMEM260Q9NX78 707 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 ADAMTSL1Q8N6G6 1762 aa18.12■□□□□ 0.49
CNKSR1-202ENST00000374253 PPP1R3GB7ZBB8 358 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 RAD21O60216 631 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 SHROOM1Q2M3G4 852 aaPredicted RBP18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 DTHD1Q6ZMT9 781 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 ZFPM1Q8IX07 1006 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 NLGN1Q8N2Q7 840 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 COA7Q96BR5 231 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 CCNT1O60563 726 aaKnown RBP18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 STAT6P42226 847 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 TCP10Q12799 353 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 RRAGBQ5VZM2 374 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 RRP36Q96EU6 259 aaKnown RBP18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
CNKSR1-202ENST00000374253 NPR1P16066 1061 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 CCDC112Q8NEF3 446 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 GDAQ9Y2T3 454 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 MORC2Q9Y6X9 1032 aaPredicted RBP18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 PDHBP11177 359 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 CDC42EP5Q6NZY7 148 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 CERS3Q8IU89 383 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 LRRC15Q8TF66 581 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 GSDMAQ96QA5 445 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 SPZ1Q9BXG8 430 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 MTMR4Q9NYA4 1195 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 PARP3Q9Y6F1 533 aa18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 V9GYY5 206 aaPredicted RBP18.1■□□□□ 0.49
CNKSR1-202ENST00000374253 LTBP1Q14766 1721 aa18.09■□□□□ 0.49
CNKSR1-202ENST00000374253 CPLX3Q8WVH0 158 aa18.09■□□□□ 0.49
CNKSR1-202ENST00000374253 ERCC5P28715 1186 aaPredicted RBP18.09■□□□□ 0.49
CNKSR1-202ENST00000374253 SLC16A2P36021 539 aa18.09■□□□□ 0.49
CNKSR1-202ENST00000374253 LONP1P36776 959 aaKnown RBP18.09■□□□□ 0.49
CNKSR1-202ENST00000374253 ZMYND12Q9H0C1 365 aa18.09■□□□□ 0.49
CNKSR1-202ENST00000374253 TXLNAP40222 546 aa18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 CCT6AP40227 531 aaKnown RBP18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 NAALADL2Q58DX5 795 aa18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 SOGA3Q5TF21 947 aa18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 ARL6IP4Q66PJ3 421 aaKnown RBP18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 DISC1Q9NRI5 854 aa18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 SERPINB13Q9UIV8 391 aa18.08■□□□□ 0.49
CNKSR1-202ENST00000374253 UBA7P41226 1012 aa18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 RBM5P52756 815 aaKnown RBP eCLIP18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 GABPAQ06546 454 aa18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 SPATA1Q5VX52 437 aa18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 SYT10Q6XYQ8 523 aa18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 FAM177A1Q8N128 213 aaPredicted RBP18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 UIMC1Q96RL1 719 aa18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 LZTS2Q9BRK4 669 aa18.08■□□□□ 0.48
CNKSR1-202ENST00000374253 NRDCO43847 1150 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 IGSF3O75054 1194 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 SPECC1LQ69YQ0 1117 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 DAGLBQ8NCG7 672 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 TBCKQ8TEA7 893 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 LRRC37AA6NMS7 1700 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 RPN1P04843 607 aaKnown RBP18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 CHRNA5P30532 468 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 APTXQ7Z2E3 356 aaKnown RBP18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 TMC4Q7Z404 712 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 EEF2KMTQ96G04 330 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 C6orf50Q9HD87 102 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms