RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 DLGAP2Q9P1A6 1054 aa16.97■□□□□ 0.31
SRPK1-204ENST00000373825 PAPOLAP51003 745 aaKnown RBP16.97■□□□□ 0.31
SRPK1-204ENST00000373825 SNX1Q13596 522 aa16.97■□□□□ 0.31
SRPK1-204ENST00000373825 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
SRPK1-204ENST00000373825 ARMCX6Q7L4S7 300 aa16.97■□□□□ 0.31
SRPK1-204ENST00000373825 ATP6V1G3Q96LB4 118 aa16.97■□□□□ 0.31
SRPK1-204ENST00000373825 IKBKGQ9Y6K9 419 aa16.97■□□□□ 0.31
SRPK1-204ENST00000373825 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
SRPK1-204ENST00000373825 TOB2Q14106 344 aaPredicted RBP16.96■□□□□ 0.31
SRPK1-204ENST00000373825 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 TRIM65Q6PJ69 517 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 OTUD6AQ7L8S5 288 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 GDAP1Q8TB36 358 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 CCDC169A6NNP5 214 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 B4DLN1 442 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 TAF5LO75529 589 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 GJC1P36383 396 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 TMEM154Q6P9G4 183 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 TC2NQ8N9U0 490 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.96■□□□□ 0.316e-7■■■■■ 111.8
SRPK1-204ENST00000373825 STXBP3O00186 592 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 FYB2Q5VWT5 728 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
SRPK1-204ENST00000373825 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
SRPK1-204ENST00000373825 RNF113AO15541 343 aaKnown RBP16.96■□□□□ 0.3
SRPK1-204ENST00000373825 CCNHP51946 323 aaPredicted RBP16.96■□□□□ 0.3
SRPK1-204ENST00000373825 CCDC93Q567U6 631 aa16.96■□□□□ 0.3
SRPK1-204ENST00000373825 HHATQ5VTY9 493 aa16.96■□□□□ 0.3
SRPK1-204ENST00000373825 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.3
SRPK1-204ENST00000373825 ETNK1Q9HBU6 452 aa16.96■□□□□ 0.3
SRPK1-204ENST00000373825 CARMIL3Q8ND23 1372 aa16.96■□□□□ 0.3
SRPK1-204ENST00000373825 FOXN1O15353 648 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 TMEM165Q9HC07 324 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 TRAF5O00463 557 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 KRT15P19012 456 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 UAP1Q16222 522 aaPredicted RBP16.95■□□□□ 0.3
SRPK1-204ENST00000373825 CYTH2Q99418 400 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
SRPK1-204ENST00000373825 SMARCAL1Q9NZC9 954 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
SRPK1-204ENST00000373825 WDR7Q9Y4E6 1490 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
SRPK1-204ENST00000373825 ATP5DP30049 168 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 MMP14P50281 582 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 KLHL30Q0D2K2 578 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 NFRKBQ6P4R8 1299 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 TBC1D22AQ8WUA7 517 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 SEC16BQ96JE7 1060 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
SRPK1-204ENST00000373825 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 FLOT1O75955 427 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ERCC5P28715 1186 aaPredicted RBP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 CETN2P41208 172 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ACBD5Q5T8D3 534 aaPredicted RBP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 GSTA5Q7RTV2 222 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 OR2W6PQ8NHA6 318 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 MYCBPAPQ8TBZ2 947 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ASIC3Q9UHC3 531 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 DNM2P50570 870 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 PLTPP55058 493 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 PDCD7Q8N8D1 485 aaKnown RBP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ARL10Q8N8L6 244 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ZIM3Q96PE6 472 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ECT2Q9H8V3 914 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 NCK2O43639 380 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 TRIM37O94972 964 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 SMCR8Q8TEV9 937 aaPredicted RBP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
SRPK1-204ENST00000373825 AP1M1Q9BXS5 423 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 ABHD10Q9NUJ1 306 aa16.94■□□□□ 0.3
SRPK1-204ENST00000373825 KRT2P35908 639 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 INF2Q27J81 1249 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 KAT2BQ92831 832 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 CHP1Q99653 195 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 DRP2Q13474 957 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 PSMD6Q15008 389 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 CCDC105Q8IYK2 499 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 VAT1LQ9HCJ6 419 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 TCEAL9Q9UHQ7 104 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 PAIP2BQ9ULR5 123 aaKnown RBP16.93■□□□□ 0.3
SRPK1-204ENST00000373825 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 FAM107AO95990 144 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 CTNNA2P26232 953 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 TPP2P29144 1249 aaPredicted RBP16.93■□□□□ 0.3
SRPK1-204ENST00000373825 PPP2R2AP63151 447 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 KLC1Q07866 573 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 PTGISQ16647 500 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 PREPLQ4J6C6 727 aaPredicted RBP16.93■□□□□ 0.3
SRPK1-204ENST00000373825 HS2ST1Q7LGA3 356 aa16.93■□□□□ 0.3
SRPK1-204ENST00000373825 NHEJ1Q9H9Q4 299 aaPredicted RBP16.93■□□□□ 0.3
SRPK1-204ENST00000373825 MAP2K7O14733 419 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms