RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 GPR153Q6NV75 609 aa19.23■□□□□ 0.67
HDAC8-202ENST00000373556 LENG1Q96BZ8 264 aaPredicted RBP19.23■□□□□ 0.67
HDAC8-202ENST00000373556 NACAP1Q9BZK3 213 aa19.23■□□□□ 0.67
HDAC8-202ENST00000373556 PRDM5Q9NQX1 630 aaPredicted RBP19.23■□□□□ 0.67
HDAC8-202ENST00000373556 MTMR4Q9NYA4 1195 aa19.23■□□□□ 0.67
HDAC8-202ENST00000373556 NRBP1Q9UHY1 535 aa19.23■□□□□ 0.67
HDAC8-202ENST00000373556 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
HDAC8-202ENST00000373556 PGK1P00558 417 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-202ENST00000373556 TSPY3P0CV98 308 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 TSPY8P0CW00 308 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 ZMYM1Q5SVZ6 1142 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 MKL1Q969V6 931 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 CHMP4CQ96CF2 233 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 NAPBQ9H115 298 aa19.22■□□□□ 0.67
HDAC8-202ENST00000373556 RAVER2Q9HCJ3 691 aaKnown RBP19.22■□□□□ 0.67
HDAC8-202ENST00000373556 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-202ENST00000373556 ZBED4O75132 1171 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 TTLL1O95922 423 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 RRP1P56182 461 aaKnown RBP19.21■□□□□ 0.67
HDAC8-202ENST00000373556 PPARAQ07869 468 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 SNX17Q15036 470 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 CCDC129Q6ZRS4 1044 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 NEDD1Q8NHV4 660 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 CNPY2Q9Y2B0 182 aa19.21■□□□□ 0.67
HDAC8-202ENST00000373556 LAMA2P24043 3122 aaKnown RBP19.2■□□□□ 0.66
HDAC8-202ENST00000373556 PLIN4Q96Q06 1357 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 TFAP4Q01664 338 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 PDE4BQ07343 736 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 SH3RF1Q7Z6J0 888 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 SLC17A8Q8NDX2 589 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 GMCL1P1Q8NEA9 526 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 SLC38A10Q9HBR0 1119 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 PDLIM7Q9NR12 457 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 FEM1BQ9UK73 627 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 ISY1Q9ULR0 285 aaKnown RBP19.2■□□□□ 0.66
HDAC8-202ENST00000373556 PHF24Q9UPV7 400 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 MCM3APO60318 1980 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 SALL3Q9BXA9 1300 aa19.2■□□□□ 0.66
HDAC8-202ENST00000373556 ATP2A1O14983 1001 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 FOXP2O15409 715 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 BMP3P12645 472 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 AKR1A1P14550 325 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 RNF180Q86T96 592 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 CRBNQ96SW2 442 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 MTMR10Q9NXD2 777 aa19.19■□□□□ 0.66
HDAC8-202ENST00000373556 DNAJC25-GNG10A0A024R161 153 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 TRIM43BA6NCK2 446 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 SNAI1O95863 264 aaPredicted RBP19.18■□□□□ 0.66
HDAC8-202ENST00000373556 SLC3A2P08195 630 aaKnown RBP19.18■□□□□ 0.66
HDAC8-202ENST00000373556 TLE2Q04725 743 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 CTDSPL2Q05D32 466 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 ANKRD45Q5TZF3 282 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 ANKRD35Q8N283 1001 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 BADQ92934 168 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 TRIM43Q96BQ3 446 aaPredicted RBP19.18■□□□□ 0.66
HDAC8-202ENST00000373556 INCENPQ9NQS7 918 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 HOMER2Q9NSB8 354 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 ZHX1Q9UKY1 873 aaPredicted RBP19.18■□□□□ 0.66
HDAC8-202ENST00000373556 SYNPO2Q9UMS6 1093 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
HDAC8-202ENST00000373556 A0A1W2PQ45 241 aaPredicted RBP19.17■□□□□ 0.66
HDAC8-202ENST00000373556 A0A1W2PQY0 241 aa19.17■□□□□ 0.66
HDAC8-202ENST00000373556 TMEM232C9JQI7 657 aa19.17■□□□□ 0.66
HDAC8-202ENST00000373556 ADAMTS4O75173 837 aa19.17■□□□□ 0.66
HDAC8-202ENST00000373556 C1orf53Q5VUE5 145 aa19.17■□□□□ 0.66
HDAC8-202ENST00000373556 SYNRGQ9UMZ2 1314 aa19.17■□□□□ 0.66
HDAC8-202ENST00000373556 IKQ13123 557 aaPredicted RBP19.16■□□□□ 0.66
HDAC8-202ENST00000373556 SHHQ15465 462 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 C9orf50Q5SZB4 431 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 VPS53Q5VIR6 699 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 MAMDC4Q6UXC1 1216 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 MSL3Q8N5Y2 521 aaKnown RBP19.16■□□□□ 0.66
HDAC8-202ENST00000373556 FGD4Q96M96 766 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 ZBTB47Q9UFB7 747 aaPredicted RBP19.16■□□□□ 0.66
HDAC8-202ENST00000373556 FAM184BQ9ULE4 1060 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.16■□□□□ 0.66
HDAC8-202ENST00000373556 TACC3Q9Y6A5 838 aa19.16■□□□□ 0.66
HDAC8-202ENST00000373556 NMT2O60551 498 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 MCCP23508 829 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 STAT2P52630 851 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 OAZ1P54368 228 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 IRX5P78411 483 aaPredicted RBP19.15■□□□□ 0.66
HDAC8-202ENST00000373556 RASGRP2Q7LDG7 609 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 CHST13Q8NET6 341 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.15■□□□□ 0.66
HDAC8-202ENST00000373556 FBXO40Q9UH90 709 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
HDAC8-202ENST00000373556 MYADML2A6NDP7 307 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 TSPY2A6NKD2 308 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 ADCY6O43306 1168 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 PQBP1O60828 265 aaKnown RBP19.14■□□□□ 0.65
HDAC8-202ENST00000373556 CLTBP09497 229 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 ITGB8P26012 769 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 SLC1A4P43007 532 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 ACLYP53396 1101 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 CNTN2Q02246 1040 aa19.14■□□□□ 0.65
HDAC8-202ENST00000373556 ACVR2BQ13705 512 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms