RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 DPF2Q92785 391 aa15.81■□□□□ 0.12
PTPRF-202ENST00000372405 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
PTPRF-202ENST00000372405 HPSEQ9Y251 543 aa15.81■□□□□ 0.12
PTPRF-202ENST00000372405 A0A1W2PRG0 241 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 TRIM75PA6NK02 468 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 CUTAO60888 179 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 PTPREP23469 700 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 SLC16A2P36021 539 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 GPATCH4Q5T3I0 446 aaKnown RBP15.8■□□□□ 0.12
PTPRF-202ENST00000372405 ADGRF4Q8IZF3 695 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 CCDC148Q8NFR7 591 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 ZMYND12Q9H0C1 365 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 CNOT7Q9UIV1 285 aaKnown RBP15.8■□□□□ 0.12
PTPRF-202ENST00000372405 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 FAM237AA0A1B0GTK4 181 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 TBC1D12O60347 775 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 PPP1R11O60927 126 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-202ENST00000372405 MMP14P50281 582 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 CCDC96Q2M329 555 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 SLFN13Q68D06 897 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 MIGA2Q7L4E1 593 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 KRI1Q8N9T8 703 aaKnown RBP15.8■□□□□ 0.12
PTPRF-202ENST00000372405 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
PTPRF-202ENST00000372405 SEC63Q9UGP8 760 aaKnown RBP15.8■□□□□ 0.12
PTPRF-202ENST00000372405 MORC2Q9Y6X9 1032 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-202ENST00000372405 KINO60870 393 aaKnown RBP15.79■□□□□ 0.12
PTPRF-202ENST00000372405 NAPAP54920 295 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 MAP3K10Q02779 954 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 RASA3Q14644 834 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 TBC1D10BQ4KMP7 808 aaPredicted RBP15.79■□□□□ 0.12
PTPRF-202ENST00000372405 TTC38Q5R3I4 469 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
PTPRF-202ENST00000372405 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 MTMR8Q96EF0 704 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
PTPRF-202ENST00000372405 ATAD5Q96QE3 1844 aa15.79■□□□□ 0.12
PTPRF-202ENST00000372405 USP17L10C9JJH3 530 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 F5H6K3 240 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 SLC1A4P43007 532 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 KLRC3Q07444 240 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 ZNF174Q15697 407 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 SPECC1Q5M775 1068 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 GALNT17Q6IS24 598 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 NOL7Q9UMY1 257 aaKnown RBP15.78■□□□□ 0.12
PTPRF-202ENST00000372405 SRPRBQ9Y5M8 271 aaKnown RBP15.78■□□□□ 0.12
PTPRF-202ENST00000372405 SMCO2A6NFE2 343 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 ZNF202O95125 648 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 NDUFB10O96000 172 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 ECE1P42892 770 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 TRAPPC10P48553 1259 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 TYRO3Q06418 890 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 ARHGAP27Q6ZUM4 889 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 COA7Q96BR5 231 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 NUP88Q99567 741 aaPredicted RBP15.78■□□□□ 0.12
PTPRF-202ENST00000372405 ZBTB21Q9ULJ3 1066 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 CEP131Q9UPN4 1083 aa15.78■□□□□ 0.12
PTPRF-202ENST00000372405 RAD21O60216 631 aa15.77■□□□□ 0.12
PTPRF-202ENST00000372405 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
PTPRF-202ENST00000372405 KIAA1755Q5JYT7 1200 aa15.77■□□□□ 0.12
PTPRF-202ENST00000372405 ACER1Q8TDN7 264 aa15.77■□□□□ 0.12
PTPRF-202ENST00000372405 ERCC4Q92889 916 aaPredicted RBP15.77■□□□□ 0.12
PTPRF-202ENST00000372405 PNMA6FA0A0J9YX94 578 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 ESYT2A0FGR8 921 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 KIF4BQ2VIQ3 1234 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 CCDC12Q8WUD4 166 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-202ENST00000372405 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 HACL1Q9UJ83 578 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 PHF20L1A8MW92 1017 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 hCG_1984214I3L0E3 225 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 CTAGE5O15320 804 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 LMNB1P20700 586 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 CAP2P40123 477 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-202ENST00000372405 PTGDRQ13258 359 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 USP49Q70CQ1 688 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 ZNF713Q8N859 430 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-202ENST00000372405 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
PTPRF-202ENST00000372405 CSRNP2Q9H175 543 aa15.76■□□□□ 0.11
PTPRF-202ENST00000372405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-202ENST00000372405 CCDC194A0A1B0GVG4 234 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 ZBTB5O15062 677 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 SYKP43405 635 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 TNNI2P48788 182 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 INF2Q27J81 1249 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 C6orf50Q9HD87 102 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 SYNPO2Q9UMS6 1093 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 GNA11P29992 359 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 MCM7P33993 719 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 TNFAIP1Q13829 316 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 SYT17Q9BSW7 474 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 KCNH3Q9ULD8 1083 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
PTPRF-202ENST00000372405 A0A087WWV3 80 aa15.74■□□□□ 0.11
PTPRF-202ENST00000372405 BMP15O95972 392 aa15.74■□□□□ 0.11
PTPRF-202ENST00000372405 IL17AQ16552 155 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms