RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ORC4O43929 436 aa22.36■■□□□ 1.17
TMEM53-201ENST00000372235 SLC1A4P43007 532 aa22.36■■□□□ 1.17
TMEM53-201ENST00000372235 STAT2P52630 851 aa22.36■■□□□ 1.17
TMEM53-201ENST00000372235 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
TMEM53-201ENST00000372235 KIFC2Q96AC6 838 aa22.36■■□□□ 1.17
TMEM53-201ENST00000372235 NUP88Q99567 741 aaPredicted RBP22.36■■□□□ 1.17
TMEM53-201ENST00000372235 SLC38A10Q9HBR0 1119 aa22.36■■□□□ 1.17
TMEM53-201ENST00000372235 STX8Q9UNK0 236 aa22.36■■□□□ 1.17
TMEM53-201ENST00000372235 PLA2G6O60733 806 aa22.35■■□□□ 1.17
TMEM53-201ENST00000372235 FGRP09769 529 aa22.35■■□□□ 1.17
TMEM53-201ENST00000372235 LRRC47Q8N1G4 583 aaKnown RBP22.35■■□□□ 1.17
TMEM53-201ENST00000372235 CHST13Q8NET6 341 aa22.35■■□□□ 1.17
TMEM53-201ENST00000372235 EXOC6Q8TAG9 804 aa22.35■■□□□ 1.17
TMEM53-201ENST00000372235 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
TMEM53-201ENST00000372235 MYH4Q9Y623 1939 aa22.35■■□□□ 1.17
TMEM53-201ENST00000372235 CCDC171Q6TFL3 1326 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 KBTBD13C9JR72 458 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 RANBP6O60518 1105 aaKnown RBP22.34■■□□□ 1.17
TMEM53-201ENST00000372235 FGAP02671 866 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 HSPD1P10809 573 aaKnown RBP22.34■■□□□ 1.17
TMEM53-201ENST00000372235 CTDSPL2Q05D32 466 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 ZNF792Q3KQV3 632 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
TMEM53-201ENST00000372235 PLEKHM2Q8IWE5 1019 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 C7orf61Q8IZ16 206 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 STAG1Q8WVM7 1258 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 FAM227BQ96M60 508 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 TINF2Q9BSI4 451 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 RNF41Q9H4P4 317 aaPredicted RBP22.34■■□□□ 1.17
TMEM53-201ENST00000372235 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
TMEM53-201ENST00000372235 CNPY2Q9Y2B0 182 aa22.34■■□□□ 1.17
TMEM53-201ENST00000372235 A0A0D9SFI3 127 aa22.33■■□□□ 1.17
TMEM53-201ENST00000372235 FOXP2O15409 715 aa22.33■■□□□ 1.17
TMEM53-201ENST00000372235 IGHDP01880 384 aa22.33■■□□□ 1.17
TMEM53-201ENST00000372235 SDSP20132 328 aa22.33■■□□□ 1.17
TMEM53-201ENST00000372235 IKQ13123 557 aaPredicted RBP22.33■■□□□ 1.17
TMEM53-201ENST00000372235 VPS53Q5VIR6 699 aa22.33■■□□□ 1.17
TMEM53-201ENST00000372235 TOMM22Q9NS69 142 aa22.33■■□□□ 1.17
TMEM53-201ENST00000372235 RBM27Q9P2N5 1060 aaKnown RBP22.33■■□□□ 1.17
TMEM53-201ENST00000372235 PFASO15067 1338 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 COL11A1P12107 1806 aaPredicted RBP22.32■■□□□ 1.16
TMEM53-201ENST00000372235 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 BMP8BP34820 402 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 NMIQ13287 307 aaPredicted RBP22.32■■□□□ 1.16
TMEM53-201ENST00000372235 TKFCQ3LXA3 575 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 RCSD1Q6JBY9 416 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 ZNF467Q7Z7K2 595 aaPredicted RBP22.32■■□□□ 1.16
TMEM53-201ENST00000372235 CPXCR1Q8N123 301 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 TRPV1Q8NER1 839 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 DIAPH3Q9NSV4 1193 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 TCP11L1Q9NUJ3 509 aa22.32■■□□□ 1.16
TMEM53-201ENST00000372235 SYNGAP1Q96PV0 1343 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 PGK2P07205 417 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 RARBP10826 455 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 NOVP48745 357 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 FXR1P51114 621 aaKnown RBP eCLIP22.31■■□□□ 1.16
TMEM53-201ENST00000372235 MFSD6Q6ZSS7 791 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 ANKRD35Q8N283 1001 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 TTC14Q96N46 770 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 SENP6Q9GZR1 1112 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-201ENST00000372235 PRO3102Q9H379 93 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 PNMA2Q9UL42 364 aa22.31■■□□□ 1.16
TMEM53-201ENST00000372235 SUPT16HQ9Y5B9 1047 aaKnown RBP22.31■■□□□ 1.16
TMEM53-201ENST00000372235 DCAF4Q8WV16 495 aa22.3■■□□□ 1.16
TMEM53-201ENST00000372235 IL17RBQ9NRM6 502 aa22.3■■□□□ 1.16
TMEM53-201ENST00000372235 AKR1A1P14550 325 aa22.29■■□□□ 1.16
TMEM53-201ENST00000372235 MCCP23508 829 aa22.29■■□□□ 1.16
TMEM53-201ENST00000372235 CCDC178Q5BJE1 867 aa22.29■■□□□ 1.16
TMEM53-201ENST00000372235 AKNAD1Q5T1N1 836 aa22.29■■□□□ 1.16
TMEM53-201ENST00000372235 MAMDC4Q6UXC1 1216 aa22.29■■□□□ 1.16
TMEM53-201ENST00000372235 RNF180Q86T96 592 aa22.29■■□□□ 1.16
TMEM53-201ENST00000372235 RAVER2Q9HCJ3 691 aaKnown RBP22.29■■□□□ 1.16
TMEM53-201ENST00000372235 ZNFX1Q9P2E3 1918 aaKnown RBP22.28■■□□□ 1.16
TMEM53-201ENST00000372235 DNAJC25-GNG10A0A024R161 153 aa22.28■■□□□ 1.16
TMEM53-201ENST00000372235 ZNF213O14771 459 aa22.28■■□□□ 1.16
TMEM53-201ENST00000372235 TOP1P11387 765 aaKnown RBP22.28■■□□□ 1.16
TMEM53-201ENST00000372235 SLC4A3P48751 1232 aa22.28■■□□□ 1.16
TMEM53-201ENST00000372235 RRP12Q5JTH9 1297 aaKnown RBP22.28■■□□□ 1.16
TMEM53-201ENST00000372235 ACAD9Q9H845 621 aa22.28■■□□□ 1.16
TMEM53-201ENST00000372235 PRKAG2Q9UGJ0 569 aa22.28■■□□□ 1.16
TMEM53-201ENST00000372235 RIPK3Q9Y572 518 aa22.28■■□□□ 1.16
TMEM53-201ENST00000372235 FRMPD3Q5JV73 1810 aa22.27■■□□□ 1.16
TMEM53-201ENST00000372235 ZNF589Q86UQ0 364 aaPredicted RBP22.27■■□□□ 1.16
TMEM53-201ENST00000372235 ESR2Q92731 530 aa22.27■■□□□ 1.16
TMEM53-201ENST00000372235 GDF15Q99988 308 aa22.27■■□□□ 1.16
TMEM53-201ENST00000372235 XPNPEP3Q9NQH7 507 aa22.27■■□□□ 1.16
TMEM53-201ENST00000372235 CTNNA3Q9UI47 895 aa22.27■■□□□ 1.16
TMEM53-201ENST00000372235 LRRC26Q2I0M4 334 aa22.26■■□□□ 1.15
TMEM53-201ENST00000372235 PRAMEF19Q5SWL8 479 aa22.26■■□□□ 1.15
TMEM53-201ENST00000372235 GJC2Q5T442 439 aaPredicted RBP22.26■■□□□ 1.15
TMEM53-201ENST00000372235 CWC27Q6UX04 472 aaKnown RBP22.26■■□□□ 1.15
TMEM53-201ENST00000372235 FAM184BQ9ULE4 1060 aa22.26■■□□□ 1.15
TMEM53-201ENST00000372235 ZMYND8Q9ULU4 1186 aaPredicted RBP22.26■■□□□ 1.15
TMEM53-201ENST00000372235 CCDC96Q2M329 555 aa22.25■■□□□ 1.15
TMEM53-201ENST00000372235 DSCC1Q9BVC3 393 aa22.25■■□□□ 1.15
TMEM53-201ENST00000372235 ABHD16BQ9H3Z7 469 aa22.25■■□□□ 1.15
TMEM53-201ENST00000372235 INCENPQ9NQS7 918 aa22.25■■□□□ 1.15
TMEM53-201ENST00000372235 PLXNA1Q9UIW2 1896 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 ALPK3Q96L96 1907 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 NMT2O60551 498 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms