RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 KCNA6P17658 529 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 RILPL1Q5EBL4 403 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 SPATA4Q8NEY3 305 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 RWDD2AQ9UIY3 292 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 GOLGA8KD6RF30 607 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 GLI1P08151 1106 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 ADD2P35612 726 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 PRCPP42785 496 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 QPCTQ16769 361 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 KDM7AQ6ZMT4 941 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 EPN3Q9H201 632 aa13.09□□□□□ -0.31
SMARCA1-201ENST00000371121 GOLGA8AA7E2F4 631 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 OPLAHO14841 1288 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 CIAO1O76071 339 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 SMTNP53814 917 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 PTGISQ16647 500 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 SLC40A1Q9NP59 571 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 CXCR5P32302 372 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 MYCBPAPQ8TBZ2 947 aa13.08□□□□□ -0.32
SMARCA1-201ENST00000371121 ARAP2Q8WZ64 1704 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 CDKL5O76039 1030 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 LIFRP42702 1097 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 FUT2Q10981 343 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 ITGB3BPQ13352 177 aaPredicted RBP13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 UBXN1Q04323 297 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 NNTQ13423 1086 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 MLXIPQ9HAP2 919 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 PLCH1Q4KWH8 1693 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 EPHB6O15197 1021 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 ECHS1P30084 290 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 SSRP1Q08945 709 aaKnown RBP13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 OR8K1Q8NGG5 319 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 CCT8L2Q96SF2 557 aa13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
SMARCA1-201ENST00000371121 TNFRSF8P28908 595 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 KANK3Q6NY19 840 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 NELFBQ8WX92 580 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 N4BP2L2Q92802 583 aaPredicted RBP13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 ANO9A1A5B4 782 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 MACROD2A1Z1Q3 448 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 NCK2O43639 380 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 PPARDQ03181 441 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 ITIH3Q06033 890 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 EEF2KMTQ96G04 330 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 COL18A1P39060 1754 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 LGALS16A8MUM7 142 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 CHUKO15111 745 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 IDEP14735 1019 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 MCM3P25205 808 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 C11orf91Q3C1V1 193 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 MS4A14Q96JA4 679 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 PSMB7Q99436 277 aa13.06□□□□□ -0.32
SMARCA1-201ENST00000371121 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 ZFYP08048 801 aaPredicted RBP13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 MIIPQ5JXC2 388 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 FUKQ8N0W3 1084 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 ZNF622Q969S3 477 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 LRWD1Q9UFC0 647 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 PRDM1O75626 825 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 APPP05067 770 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 NAALADL2Q58DX5 795 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 PHF20Q9BVI0 1012 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 GDF3Q9NR23 364 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 H0YGN5 161 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 PHKG2P15735 406 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 TRIM14Q14142 442 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 NLRP14Q86W24 1093 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 STRBPQ96SI9 672 aaKnown RBP13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 OSBPL9Q96SU4 736 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 STIM2Q9P246 746 aa13.05□□□□□ -0.32
SMARCA1-201ENST00000371121 SLC12A6Q9UHW9 1150 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms