RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ARHGAP4P98171 946 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 TAGLNQ01995 201 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 LMOD3Q0VAK6 560 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 SFSWAPQ12872 951 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 HDAC1Q13547 482 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 DHX8Q14562 1220 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 RGL3Q3MIN7 710 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 TRAPPC3LQ5T215 181 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 RGL4Q8IZJ4 473 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 PDILTQ8N807 584 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 PRPF38AQ8NAV1 312 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 TTC16Q8NEE8 873 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 GPR152Q8TDT2 470 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 HHIPL1Q96JK4 782 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 LRFN3Q9BTN0 628 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 ZNF277Q9NRM2 450 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 METTL5Q9NRN9 209 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 MBIPQ9NS73 344 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 MAP3K20Q9NYL2 800 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 SFMBT1Q9UHJ3 866 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 DCTN4Q9UJW0 460 aa4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 FNDC3AQ9Y2H6 1198 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 RTCBQ9Y3I0 505 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-205ENST00000368295 NCOR1O75376 2440 aa4.34□□□□□ -1.72
ECHDC1-205ENST00000368295 POLRMTO00411 1230 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 PLIN1O60240 522 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 PDGFRBP09619 1106 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 BCRP11274 1271 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 BMP4P12644 408 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 XRCC5P13010 732 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 CD33P20138 364 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 MX2P20592 715 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 MAP2K3P46734 347 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 ZNF157P51786 506 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 CAP1Q01518 475 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 DNM1Q05193 864 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 NEUROD1Q13562 356 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 MAPRE1Q15691 268 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 RGMBQ6NW40 437 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 OLFM4Q6UX06 510 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 METTL16Q86W50 562 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 ATCAYQ86WG3 371 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 CMTR1Q8N1G2 835 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 STAG1Q8WVM7 1258 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 ASB16Q96NS5 453 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 EFCC1Q9HA90 598 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 POLIQ9UNA4 740 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 TRAK1Q9UPV9 953 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 DICER1Q9UPY3 1922 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 TRANK1O15050 2925 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 LOC102724428A0A0B4J2F2 783 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 BICDL2A1A5D9 508 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 FAM86C2PA6NEL3 165 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 FGAP02671 866 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 MAPK1P28482 360 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 SIK1P57059 783 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 EHHADHQ08426 723 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 GAS6Q14393 721 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 ECM1Q16610 540 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 L1TD1Q5T7N2 865 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 INTS3Q68E01 1043 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 ZSCAN29Q8IWY8 852 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 CEP120Q8N960 986 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 RUNDC1Q96C34 613 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 MRFAP1L1Q96HT8 127 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 CITED4Q96RK1 184 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 CASS4Q9NQ75 786 aa4.33□□□□□ -1.72
ECHDC1-205ENST00000368295 KIF1BO60333 1816 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 EGFRP00533 1210 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 RFC4P35249 363 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 SPEM2Q0P670 501 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 CCINQ13939 588 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 SLC4A8Q2Y0W8 1093 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 OTOP1Q7RTM1 612 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 DRC7Q8IY82 874 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 MSL3Q8N5Y2 521 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 SAMD3Q8N6K7 520 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 C1orf131Q8NDD1 294 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 ANKRD24Q8TF21 1146 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 LTV1Q96GA3 475 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 ZNF512BQ96KM6 892 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 PNMA5Q96PV4 448 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 RBCK1Q9BYM8 510 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 RSPH9Q9H1X1 276 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 MRPL42Q9Y6G3 142 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 RBBP6Q7Z6E9 1792 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 SPTBN4Q9H254 2564 aa4.32□□□□□ -1.72
ECHDC1-205ENST00000368295 IFRD1O00458 451 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 TIMM44O43615 452 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 XYLBO75191 536 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 GRNP28799 593 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 MMP14P50281 582 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 CTBSQ01459 385 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 ARID5AQ03989 594 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 TBC1D10BQ4KMP7 808 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms