RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 C16orf45Q96MC5 204 aaPredicted RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 SEC62Q99442 399 aaKnown RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 GLTPD2A6NH11 291 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 CCDC175P0C221 793 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 APLP1P51693 650 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 SLC9C1Q4G0N8 1177 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 UTP14CQ5TAP6 766 aaKnown RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 CEP135Q66GS9 1140 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 LMBR1Q8WVP7 490 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 MTA3Q9BTC8 594 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 TPCN1Q9ULQ1 816 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 MED1Q15648 1581 aaPredicted RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 FMN2Q9NZ56 1722 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 PRDX5P30044 214 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 CLCN1P35523 988 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 SSR1P43307 286 aaKnown RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 HMGCS2P54868 508 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 FCGRTP55899 365 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 GNG11P61952 73 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 DGKZQ13574 1117 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 BMS1Q14692 1282 aaKnown RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 NOLC1Q14978 699 aaKnown RBP eCLIP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 NOSTRINQ8IVI9 506 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 MICALL1Q8N3F8 863 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 IMPG2Q9BZV3 1241 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 ANTXR1Q9H6X2 564 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 EFCC1Q9HA90 598 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 ZNF70Q9UC06 446 aaPredicted RBP7.87□□□□□ -1.15
RAB5B-201ENST00000360299 TRPC6Q9Y210 931 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 MTMR6Q9Y217 621 aa7.87□□□□□ -1.15
RAB5B-201ENST00000360299 KRT86O43790 486 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 JAK2O60674 1132 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 TOMM70O94826 608 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 PDIA3P30101 505 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 PI16Q6UXB8 463 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 RETREG2Q8NC44 543 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 PNMA1Q8ND90 353 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 PHKBQ93100 1093 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 RNF26Q9BY78 433 aaPredicted RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 NT5C3AQ9H0P0 336 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 KBTBD13C9JR72 458 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 TUBBP07437 444 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 CYP21A2P08686 494 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 FBXO18Q8NFZ0 1043 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 IQCDQ96DY2 449 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 TTC12Q9H892 705 aaPredicted RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 LUC7L2Q9Y383 392 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 MYL3P08590 195 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 CCT6AP40227 531 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 TRAPPC10P48553 1259 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 GTF2A2P52657 109 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 NLRP12P59046 1061 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 SEPT7Q16181 437 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 GNPTABQ3T906 1256 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 GPATCH4Q5T3I0 446 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 NEK11Q8NG66 645 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 LRWD1Q9UFC0 647 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 BCL9O00512 1426 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 CAMTA1Q9Y6Y1 1673 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 ANKRD62A6NC57 917 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 USP17L10C9JJH3 530 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 hCG_1984214I3L0E3 225 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 CCNT1O60563 726 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 TACC1O75410 805 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 ALDH1A1P00352 501 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 LIFRP42702 1097 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 APBB1IPQ7Z5R6 666 aaPredicted RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 FOXP4Q8IVH2 680 aaPredicted RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 ZNF713Q8N859 430 aaPredicted RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
RAB5B-201ENST00000360299 IMPACTQ9P2X3 320 aa7.86□□□□□ -1.15
RAB5B-201ENST00000360299 PXDNQ92626 1479 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 POLR2DO15514 142 aaKnown RBP7.85□□□□□ -1.15
RAB5B-201ENST00000360299 NOP2P46087 812 aaKnown RBP7.85□□□□□ -1.15
RAB5B-201ENST00000360299 IGBP1P78318 339 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 SEPT14Q6ZU15 432 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 TRIM6Q9C030 488 aaPredicted RBP7.85□□□□□ -1.15
RAB5B-201ENST00000360299 SCG2P13521 617 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 CMA1P23946 247 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 USP8P40818 1118 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 KIF5AQ12840 1032 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 CYP4F22Q6NT55 531 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 ZBTB33Q86T24 672 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 RASEFQ8IZ41 740 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 BLIDQ8IZY5 108 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 TRIML1Q8N9V2 468 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 CCDC42Q96M95 316 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 NUP58Q9BVL2 599 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 MMRN2Q9H8L6 949 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 IFNKQ9P0W0 207 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 XRN1Q8IZH2 1706 aaKnown RBP7.85□□□□□ -1.15
RAB5B-201ENST00000360299 RASGRF1Q13972 1273 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 NECTIN1Q15223 517 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 SF3B3Q15393 1217 aaKnown RBP7.85□□□□□ -1.15
RAB5B-201ENST00000360299 METTL13Q8N6R0 699 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 DDX12PQ92771 950 aa7.85□□□□□ -1.15
RAB5B-201ENST00000360299 FAM212AQ96EL1 285 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms