RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 FDX1P10109 184 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CPA1P15085 419 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SLC16A2P36021 539 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SYDE2Q5VT97 1194 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ZNF654Q8IZM8 581 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CTCFLQ8NI51 663 aaPredicted RBP22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ARHGAP39Q9C0H5 1083 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SENP2Q9HC62 589 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 GPHNQ9NQX3 736 aaPredicted RBP22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 BTBD7Q9P203 1132 aa22.37■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CASP8AP2Q9UKL3 1982 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 RPS6KB1P23443 525 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 MAPK4P31152 587 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 LIFRP42702 1097 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TTBK2Q6IQ55 1244 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 NCAPG2Q86XI2 1143 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SPATC1LQ9H0A9 340 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 IVNS1ABPQ9Y6Y0 642 aa22.36■■□□□ 1.17
HLA-DRB1-201ENST00000360004 PLA2G6O60733 806 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CNMDO75829 334 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 DDAH1O94760 285 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 GNRH1P01148 92 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CALM1P0DP23 149 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CALM2P0DP24 149 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CALM3P0DP25 149 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SNHG28P0DPA3 235 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 KIF5BP33176 963 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ANAPC15P60006 121 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 EXOSC10Q01780 885 aaKnown RBP22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 CCDC174Q6PII3 467 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 Q6ZUG5 572 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 PRR12Q9ULL5 1215 aa22.35■■□□□ 1.17
HLA-DRB1-201ENST00000360004 STAT3P40763 770 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TMEM132BQ14DG7 1078 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 Q3C1V9 767 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SNRNP48Q6IEG0 339 aaKnown RBP22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 RUFY3Q7L099 469 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TRIM47Q96LD4 638 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 MYL10Q9BUA6 226 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 UPF3BQ9BZI7 483 aaKnown RBP22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 UBA5Q9GZZ9 404 aa22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 RAVER2Q9HCJ3 691 aaKnown RBP22.34■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SLC25A27O95847 323 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 COPB2P35606 906 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SNAP25P60880 206 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 COL9A3Q14050 684 aaPredicted RBP22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 GRM4Q14833 912 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 OTOP1Q7RTM1 612 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 MICU3Q86XE3 530 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 RAB11FIP4Q86YS3 637 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 MOV10L1Q9BXT6 1211 aaKnown RBP22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TEX13BQ9BXU2 312 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 TM6SF1Q9BZW5 370 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 SLC38A10Q9HBR0 1119 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ZSWIM6Q9HCJ5 1215 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 VAT1LQ9HCJ6 419 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 ADAMTS5Q9UNA0 930 aa22.33■■□□□ 1.17
HLA-DRB1-201ENST00000360004 KLF18A0A0U1RQI7 1052 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 KLRF2D3W0D1 207 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 BTNL9Q6UXG8 535 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PLEKHH3Q7Z736 793 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 CCDC144CPQ8IYA2 1237 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 BRF1Q92994 677 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 C22orf23Q9BZE7 217 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PORCNQ9H237 461 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PDRG1Q9NUG6 133 aa22.32■■□□□ 1.16
HLA-DRB1-201ENST00000360004 ZBTB43O43298 467 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 ERCC3P19447 782 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RXRAP19793 462 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 OAZ1P54368 228 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PRMT2P55345 433 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 PKN2Q16513 984 aaKnown RBP22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 POTEEQ6S8J3 1075 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 SGMS1Q86VZ5 419 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 SHCBP1Q8NEM2 672 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RAET1EQ8TD07 263 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 CPVLQ9H3G5 476 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 MROH8Q9H579 483 aa22.31■■□□□ 1.16
HLA-DRB1-201ENST00000360004 GNAQP50148 359 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 TROAPQ12815 778 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 COL13A1Q5TAT6 717 aaPredicted RBP22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 GPR142Q7Z601 462 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 RIOX2Q8IUF8 465 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 STAG2Q8N3U4 1231 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 SRRDQ9UH36 339 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 MAD2L2Q9UI95 211 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 ZNF214Q9UL59 606 aaPredicted RBP22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 CCPG1Q9ULG6 757 aa22.3■■□□□ 1.16
HLA-DRB1-201ENST00000360004 GOLGA8AA7E2F4 631 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 GOLGA8BA8MQT2 603 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 ALAS1P13196 640 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 CTGFP29279 349 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 APOBRQ0VD83 1088 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 APOA5Q6Q788 366 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 ADGRF4Q8IZF3 695 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 SOCS4Q8WXH5 440 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 MAP3K14Q99558 947 aa22.29■■□□□ 1.16
HLA-DRB1-201ENST00000360004 NUDT12Q9BQG2 462 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms