RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SPICE1Q8N0Z3 855 aa26.65■■□□□ 1.86
SDF4-202ENST00000360001 LINC00301Q8NCQ3 95 aa26.65■■□□□ 1.86
SDF4-202ENST00000360001 DCPSQ96C86 337 aaKnown RBP26.65■■□□□ 1.86
SDF4-202ENST00000360001 PGBD1Q96JS3 809 aa26.65■■□□□ 1.86
SDF4-202ENST00000360001 GZF1Q9H116 711 aaPredicted RBP26.65■■□□□ 1.86
SDF4-202ENST00000360001 SH2D4AQ9H788 454 aa26.65■■□□□ 1.86
SDF4-202ENST00000360001 USP17L10C9JJH3 530 aa26.64■■□□□ 1.86
SDF4-202ENST00000360001 YEATS4O95619 227 aa26.64■■□□□ 1.86
SDF4-202ENST00000360001 EPHX2P34913 555 aa26.64■■□□□ 1.86
SDF4-202ENST00000360001 VCPKMTQ9H867 229 aa26.64■■□□□ 1.86
SDF4-202ENST00000360001 PNMA6FA0A0J9YX94 578 aa26.64■■□□□ 1.85
SDF4-202ENST00000360001 hCG_1984214I3L0E3 225 aa26.64■■□□□ 1.85
SDF4-202ENST00000360001 SOCS7O14512 581 aa26.64■■□□□ 1.85
SDF4-202ENST00000360001 TOB1P50616 345 aaPredicted RBP26.64■■□□□ 1.85
SDF4-202ENST00000360001 SUPT20HL1Q3ZLR7 823 aa26.64■■□□□ 1.85
SDF4-202ENST00000360001 EARS2Q5JPH6 523 aaKnown RBP26.64■■□□□ 1.85
SDF4-202ENST00000360001 ZNF713Q8N859 430 aaPredicted RBP26.64■■□□□ 1.85
SDF4-202ENST00000360001 PCDHA4Q9UN74 947 aa26.64■■□□□ 1.85
SDF4-202ENST00000360001 FZD1Q9UP38 647 aa26.64■■□□□ 1.85
SDF4-202ENST00000360001 SCN4AP35499 1836 aa26.63■■□□□ 1.85
SDF4-202ENST00000360001 NAPAP54920 295 aa26.63■■□□□ 1.85
SDF4-202ENST00000360001 TPRNQ4KMQ1 711 aa26.63■■□□□ 1.85
SDF4-202ENST00000360001 BLIDQ8IZY5 108 aa26.63■■□□□ 1.85
SDF4-202ENST00000360001 DAGLBQ8NCG7 672 aa26.63■■□□□ 1.85
SDF4-202ENST00000360001 WRNIP1Q96S55 665 aa26.63■■□□□ 1.85
SDF4-202ENST00000360001 FAM205CA6NFA0 338 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 RILPL1Q5EBL4 403 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 GALNT17Q6IS24 598 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 CAVIN1Q6NZI2 390 aaKnown RBP26.62■■□□□ 1.85
SDF4-202ENST00000360001 BTNL9Q6UXG8 535 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 CCDC12Q8WUD4 166 aaPredicted RBP26.62■■□□□ 1.85
SDF4-202ENST00000360001 ZMYND12Q9H0C1 365 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 TMEM232C9JQI7 657 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 M0R2N6 131 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 ZBTB5O15062 677 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 PPP1R11O60927 126 aaPredicted RBP26.62■■□□□ 1.85
SDF4-202ENST00000360001 STK38Q15208 465 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 SF3A1Q15459 793 aaKnown RBP26.62■■□□□ 1.85
SDF4-202ENST00000360001 NOM1Q5C9Z4 860 aaKnown RBP26.62■■□□□ 1.85
SDF4-202ENST00000360001 SULF1Q8IWU6 871 aa26.62■■□□□ 1.85
SDF4-202ENST00000360001 ADM5C9JUS6 153 aa26.61■■□□□ 1.85
SDF4-202ENST00000360001 ZYXQ15942 572 aaKnown RBP26.61■■□□□ 1.85
SDF4-202ENST00000360001 DLK2Q6UY11 383 aa26.61■■□□□ 1.85
SDF4-202ENST00000360001 SCYL3Q8IZE3 742 aa26.61■■□□□ 1.85
SDF4-202ENST00000360001 KLRG1Q96E93 195 aa26.61■■□□□ 1.85
SDF4-202ENST00000360001 KCNG4Q8TDN1 519 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 ZC3H15Q8WU90 426 aaKnown RBP26.6■■□□□ 1.85
SDF4-202ENST00000360001 ZKSCAN4Q969J2 545 aaPredicted RBP26.6■■□□□ 1.85
SDF4-202ENST00000360001 POTECB2RU33 542 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 SLC39A14Q15043 492 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 PTPAQ15257 358 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 FAM83BQ5T0W9 1011 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 SYDE2Q5VT97 1194 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 COA7Q96BR5 231 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 TMEM63CQ9P1W3 806 aa26.6■■□□□ 1.85
SDF4-202ENST00000360001 ESYT2A0FGR8 921 aa26.59■■□□□ 1.85
SDF4-202ENST00000360001 GOLGA6L4A6NEF3 574 aa26.59■■□□□ 1.85
SDF4-202ENST00000360001 SPTLC2O15270 562 aa26.59■■□□□ 1.85
SDF4-202ENST00000360001 KRT26Q7Z3Y9 468 aa26.59■■□□□ 1.85
SDF4-202ENST00000360001 FEZ1Q99689 392 aa26.59■■□□□ 1.85
SDF4-202ENST00000360001 TAF1DQ9H5J8 278 aaPredicted RBP26.59■■□□□ 1.85
SDF4-202ENST00000360001 WDR90Q96KV7 1748 aa26.59■■□□□ 1.85
SDF4-202ENST00000360001 SMCO2A6NFE2 343 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 QRICH1Q2TAL8 776 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 IQCA1LA6NCM1 817 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 ME1P48163 572 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 IKQ13123 557 aaPredicted RBP26.58■■□□□ 1.85
SDF4-202ENST00000360001 CDC37Q16543 378 aaPredicted RBP26.58■■□□□ 1.85
SDF4-202ENST00000360001 KIAA1683Q9H0B3 1180 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 PCDHA7Q9UN72 937 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 PCDHA6Q9UN73 950 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 PCDHA8Q9Y5H6 950 aa26.58■■□□□ 1.85
SDF4-202ENST00000360001 PPP1R18Q6NYC8 613 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 PIK3AP1Q6ZUJ8 805 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 RASGRP4Q8TDF6 673 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 C6orf50Q9HD87 102 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 PCDHB6Q9Y5E3 794 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 USP2O75604 605 aaPredicted RBP26.57■■□□□ 1.84
SDF4-202ENST00000360001 PTPRAP18433 802 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 GNA11P29992 359 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 STAT2P52630 851 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.57■■□□□ 1.841e-7■□□□□ 10.5
SDF4-202ENST00000360001 WDR18Q9BV38 432 aa26.57■■□□□ 1.84
SDF4-202ENST00000360001 NOL9Q5SY16 702 aaKnown RBP26.56■■□□□ 1.84
SDF4-202ENST00000360001 PICK1Q9NRD5 415 aa26.56■■□□□ 1.84
SDF4-202ENST00000360001 PRR12Q9ULL5 1215 aa26.56■■□□□ 1.84
SDF4-202ENST00000360001 LIG1P18858 919 aa26.55■■□□□ 1.84
SDF4-202ENST00000360001 NOL7Q9UMY1 257 aaKnown RBP26.55■■□□□ 1.84
SDF4-202ENST00000360001 PHIPQ8WWQ0 1821 aa26.55■■□□□ 1.84
SDF4-202ENST00000360001 PLA2G6O60733 806 aa26.55■■□□□ 1.84
SDF4-202ENST00000360001 PPP6R2O75170 966 aa26.55■■□□□ 1.84
SDF4-202ENST00000360001 ATP2B1P20020 1258 aa26.55■■□□□ 1.84
SDF4-202ENST00000360001 PRKG1Q13976 671 aa26.55■■□□□ 1.84
SDF4-202ENST00000360001 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.55■■□□□ 1.84
SDF4-202ENST00000360001 WNT7AO00755 349 aa26.54■■□□□ 1.84
SDF4-202ENST00000360001 SNAP25P60880 206 aa26.54■■□□□ 1.84
SDF4-202ENST00000360001 GSE1Q14687 1217 aa26.54■■□□□ 1.84
SDF4-202ENST00000360001 BICD2Q8TD16 824 aa26.54■■□□□ 1.84
SDF4-202ENST00000360001 LPAR1Q92633 364 aa26.54■■□□□ 1.84
SDF4-202ENST00000360001 PAPPA2Q9BXP8 1791 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms