RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 C6orf50Q9HD87 102 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 PSME4Q14997 1843 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 LAD1O00515 517 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 NAPAP54920 295 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 DNTTIP2Q5QJE6 756 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 SOGA3Q5TF21 947 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 USP17L2Q6R6M4 530 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 SUPT20HQ8NEM7 779 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 RIOX1Q9H6W3 641 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 IFNKQ9P0W0 207 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 ECE2O60344 883 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 TTLL1O95922 423 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 AKR1B1P15121 316 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 TXLNAP40222 546 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 FANCCQ00597 558 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 LRRC8AQ8IWT6 810 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 C4orf32Q8N8J7 132 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 IQUBQ8NA54 791 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 CACTINQ8WUQ7 758 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 CCDC17Q96LX7 622 aa20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 XPO4Q9C0E2 1151 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 DHX36Q9H2U1 1008 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 R3HCC1Q9Y3T6 440 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-203ENST00000359895 SIPA1L1O43166 1804 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 A0A087X0B3 334 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 ESYT2A0FGR8 921 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 ADAMTS3O15072 1205 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 PDHBP11177 359 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 LMOD1P29536 600 aaPredicted RBP20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 DACT2Q5SW24 774 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 PAGE5Q96GU1 130 aa20.79■□□□□ 0.92
PDLIM7-203ENST00000359895 USP17L5A8MUK1 530 aa20.78■□□□□ 0.92
PDLIM7-203ENST00000359895 SNHG28P0DPA3 235 aa20.78■□□□□ 0.92
PDLIM7-203ENST00000359895 BMP6P22004 513 aa20.78■□□□□ 0.92
PDLIM7-203ENST00000359895 SHMT1P34896 483 aa20.78■□□□□ 0.92
PDLIM7-203ENST00000359895 GSDMAQ96QA5 445 aa20.78■□□□□ 0.92
PDLIM7-203ENST00000359895 HSD3B7Q9H2F3 369 aa20.78■□□□□ 0.92
PDLIM7-203ENST00000359895 SMCO2A6NFE2 343 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 ERCC5P28715 1186 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 PRPHP41219 470 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 LRMPQ12912 555 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 ORC2Q13416 577 aaPredicted RBP20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 GRIPAP1Q4V328 841 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 GRAMD1CQ8IYS0 662 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 ENOX1Q8TC92 643 aaKnown RBP20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 RASGRP4Q8TDF6 673 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 IDI2Q9BXS1 227 aa20.77■□□□□ 0.92
PDLIM7-203ENST00000359895 DPYDQ12882 1025 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 NONOQ15233 471 aaKnown RBP eCLIP20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 E2F4Q16254 413 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 DTHD1Q6ZMT9 781 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 FILIP1Q7Z7B0 1213 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 HOMER1Q86YM7 354 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 C17orf53Q8N3J3 647 aaPredicted RBP20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 CCDC150Q8NCX0 1101 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 PIGSQ96S52 555 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 SERPINA10Q9UK55 444 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 SERPINC1P01008 464 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 AFMP43652 599 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 IL17AQ16552 155 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 INF2Q27J81 1249 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 KIAA0825Q8IV33 1275 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 C7orf43Q8WVR3 580 aa20.76■□□□□ 0.91
PDLIM7-203ENST00000359895 CHRNA5P30532 468 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 UBASH3AP57075 661 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 PPP1R18Q6NYC8 613 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 TMC6Q7Z403 805 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 LRRC47Q8N1G4 583 aaKnown RBP20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 CPVLQ9H3G5 476 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 FANCLQ9NW38 375 aa20.75■□□□□ 0.91
PDLIM7-203ENST00000359895 GTPBP6O43824 516 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 ZNF543Q08ER8 600 aa20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 PRIMPOLQ96LW4 560 aa20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 KCNQ5Q9NR82 932 aa20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 PI4KBQ9UBF8 816 aa20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 FRMPD2Q68DX3 1309 aaPredicted RBP20.74■□□□□ 0.91
PDLIM7-203ENST00000359895 NRDCO43847 1150 aa20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 ATP1A3P13637 1013 aa20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 RBM5P52756 815 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 NFIAQ12857 509 aa20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 PDXDC2PQ6P474 469 aa20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 ARFGEF1Q9Y6D6 1849 aa20.73■□□□□ 0.91
PDLIM7-203ENST00000359895 MPHOSPH10O00566 681 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 NEK8Q86SG6 692 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 REXO1Q8N1G1 1221 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 AK8Q96MA6 479 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 CCSER1Q9C0I3 900 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 ZNF219Q9P2Y4 722 aaPredicted RBP20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 COL2A1P02458 1487 aaPredicted RBP20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 PNMA6FA0A0J9YX94 578 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 SKILP12757 684 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 AOC3Q16853 763 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 CFAP100Q494V2 611 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 TRIM34Q9BYJ4 488 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 RMND1Q9NWS8 449 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms