RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 Q6ZUG5 572 aa28.37■■■□□ 2.13
ALKAL1-201ENST00000358543 C22orf23Q9BZE7 217 aa28.37■■■□□ 2.13
ALKAL1-201ENST00000358543 UPF2Q9HAU5 1272 aaKnown RBP28.37■■■□□ 2.13
ALKAL1-201ENST00000358543 GPCPD1Q9NPB8 672 aa28.37■■■□□ 2.13
ALKAL1-201ENST00000358543 SLC12A7Q9Y666 1083 aa28.37■■■□□ 2.13
ALKAL1-201ENST00000358543 FGD1P98174 961 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 KIF22Q14807 665 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 GRM4Q14833 912 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 REPS2Q8NFH8 660 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 SLC38A10Q9HBR0 1119 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 PRR12Q9ULL5 1215 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 CASP8AP2Q9UKL3 1982 aa28.36■■■□□ 2.13
ALKAL1-201ENST00000358543 A0A0G2JMZ2 1700 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 PALM3A6NDB9 673 aaPredicted RBP28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 ATP2A1O14983 1001 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 ZBED4O75132 1171 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 GOLGA8HP0CJ92 632 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 CALM1P0DP23 149 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 CALM2P0DP24 149 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 CALM3P0DP25 149 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 RBM25P49756 843 aaKnown RBP28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 CCNA1P78396 465 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 ARHGEF6Q15052 776 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 SAMD1Q6SPF0 538 aaPredicted RBP28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 MAD2L2Q9UI95 211 aa28.35■■■□□ 2.13
ALKAL1-201ENST00000358543 PEX10O60683 326 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 OAZ1P54368 228 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 TMEM132BQ14DG7 1078 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 SYDE2Q5VT97 1194 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 SYNE3Q6ZMZ3 975 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 CD99L2Q8TCZ2 262 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 UPF3BQ9BZI7 483 aaKnown RBP28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 SPATC1LQ9H0A9 340 aa28.34■■■□□ 2.13
ALKAL1-201ENST00000358543 GNRH1P01148 92 aa28.33■■■□□ 2.13
ALKAL1-201ENST00000358543 SLC16A2P36021 539 aa28.33■■■□□ 2.13
ALKAL1-201ENST00000358543 NUP133Q8WUM0 1156 aa28.33■■■□□ 2.13
ALKAL1-201ENST00000358543 ALDH8A1Q9H2A2 487 aaPredicted RBP28.33■■■□□ 2.13
ALKAL1-201ENST00000358543 ZNF214Q9UL59 606 aaPredicted RBP28.33■■■□□ 2.13
ALKAL1-201ENST00000358543 KIF5BP33176 963 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 PSMC4P43686 418 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 RCAN1P53805 252 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 APOA5Q6Q788 366 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 STAG2Q8N3U4 1231 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 CTCFLQ8NI51 663 aaPredicted RBP28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 PDRG1Q9NUG6 133 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 BRPF3Q9ULD4 1205 aa28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 CTDP1Q9Y5B0 961 aaPredicted RBP28.32■■■□□ 2.12
ALKAL1-201ENST00000358543 KLRF2D3W0D1 207 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 CTGFP29279 349 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 MAPK4P31152 587 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 STAT3P40763 770 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 FCGRTP55899 365 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 EVCP57679 992 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 SHCBP1Q8NEM2 672 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 BRF1Q92994 677 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 MYL10Q9BUA6 226 aa28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 MOV10L1Q9BXT6 1211 aaKnown RBP28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 RANBP17Q9H2T7 1088 aaKnown RBP28.31■■■□□ 2.12
ALKAL1-201ENST00000358543 SLC25A27O95847 323 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 CAP1Q01518 475 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 RIOX2Q8IUF8 465 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 TRIM47Q96LD4 638 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 TEX13BQ9BXU2 312 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 ARHGAP39Q9C0H5 1083 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 UBA5Q9GZZ9 404 aa28.3■■■□□ 2.12
ALKAL1-201ENST00000358543 KLF18A0A0U1RQI7 1052 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 ZBTB43O43298 467 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 FMNL1O95466 1100 aaPredicted RBP28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 SMARCA1P28370 1054 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 COPB2P35606 906 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 GNAQP50148 359 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 TOB2Q14106 344 aaPredicted RBP28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 PLS1Q14651 629 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 FANCBQ8NB91 859 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 LZTS2Q9BRK4 669 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 PORCNQ9H237 461 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 EFCC1Q9HA90 598 aa28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 COL11A1P12107 1806 aaPredicted RBP28.29■■■□□ 2.12
ALKAL1-201ENST00000358543 HOXD10P28358 340 aa28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 APOBRQ0VD83 1088 aa28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 CCAR1Q8IX12 1150 aaKnown RBP28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 ADGRF4Q8IZF3 695 aa28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 KIF2CQ99661 725 aa28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 MROH8Q9H579 483 aa28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 PNMA2Q9UL42 364 aa28.28■■■□□ 2.12
ALKAL1-201ENST00000358543 ZNF536O15090 1300 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 TNPO2O14787 897 aaKnown RBP28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 PPP2R5BQ15173 497 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 CTU1Q7Z7A3 348 aaKnown RBP28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 MICU3Q86XE3 530 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 CPXCR1Q8N123 301 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 CPVLQ9H3G5 476 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 RIOX1Q9H6W3 641 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 RAVER2Q9HCJ3 691 aaKnown RBP28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 MGAMO43451 1857 aa28.27■■■□□ 2.12
ALKAL1-201ENST00000358543 ERCC3P19447 782 aa28.26■■■□□ 2.11
ALKAL1-201ENST00000358543 SNRNP48Q6IEG0 339 aaKnown RBP28.26■■■□□ 2.11
ALKAL1-201ENST00000358543 OTOP1Q7RTM1 612 aa28.26■■■□□ 2.11
ALKAL1-201ENST00000358543 COA7Q96BR5 231 aa28.26■■■□□ 2.11
ALKAL1-201ENST00000358543 JMJD4Q9H9V9 463 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms