RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CASP1P29466 404 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 LSP1P33241 339 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 ZAP70P43403 619 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 TDO2P48775 406 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
LRP8-202ENST00000347547 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 TSGA10Q9BZW7 698 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 TJP1Q07157 1748 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 AHDC1Q5TGY3 1603 aaPredicted RBP17.51■□□□□ 0.39
LRP8-202ENST00000347547 CCDC189A1A4V9 331 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 H7C1D1 291 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 ADD2P35612 726 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 SCARF1Q14162 830 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 ALX1Q15699 326 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 RRAGBQ5VZM2 374 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 ZNF507Q8TCN5 953 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 MAGEC3Q8TD91 643 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 LRRC1Q9BTT6 524 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 LACRTQ9GZZ8 138 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 DMGDHQ9UI17 866 aaKnown RBP17.51■□□□□ 0.39
LRP8-202ENST00000347547 TAOK2Q9UL54 1235 aa17.51■□□□□ 0.39
LRP8-202ENST00000347547 ADORA1P30542 326 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 RCAN1P53805 252 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 TTC19Q6DKK2 380 aaPredicted RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 NELFBQ8WX92 580 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 MIEF2Q96C03 454 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 PYM1Q9BRP8 204 aaKnown RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 CD248Q9HCU0 757 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 XDHP47989 1333 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 RCCD1A6NED2 376 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 CCDC40Q4G0X9 1142 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 ZNF658Q5TYW1 1059 aaPredicted RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 CD302Q8IX05 232 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 ZNF473Q8WTR7 871 aaKnown RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 HDAC7Q8WUI4 952 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 ZNF594Q96JF6 807 aaPredicted RBP17.5■□□□□ 0.39
LRP8-202ENST00000347547 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 JADE2Q9NQC1 790 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 STIM2Q9P246 746 aa17.5■□□□□ 0.39
LRP8-202ENST00000347547 PDS5AQ29RF7 1337 aaKnown RBP17.49■□□□□ 0.39
LRP8-202ENST00000347547 IPO7O95373 1038 aaKnown RBP17.49■□□□□ 0.39
LRP8-202ENST00000347547 CDK17Q00537 523 aa17.49■□□□□ 0.39
LRP8-202ENST00000347547 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
LRP8-202ENST00000347547 RTN1Q16799 776 aa17.49■□□□□ 0.39
LRP8-202ENST00000347547 SPATA4Q8NEY3 305 aa17.49■□□□□ 0.39
LRP8-202ENST00000347547 TRIM58Q8NG06 486 aa17.49■□□□□ 0.39
LRP8-202ENST00000347547 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
LRP8-202ENST00000347547 RMND1Q9NWS8 449 aa17.49■□□□□ 0.39
LRP8-202ENST00000347547 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
LRP8-202ENST00000347547 GTPBP6O43824 516 aaPredicted RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 PARP1P09874 1014 aaKnown RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 EEF1GP26641 437 aaKnown RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 NF2P35240 595 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 PTGISQ16647 500 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 GLE1Q53GS7 698 aaKnown RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 C6orf89Q6UWU4 347 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 IRF2BP1Q8IU81 584 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 CCDC50Q8IVM0 306 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 RETREG2Q8NC44 543 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 TTYH3Q9C0H2 523 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 ACTR5Q9H9F9 607 aaPredicted RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 TFR2Q9UP52 801 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 IFIT3O14879 490 aaKnown RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 PPP1R37O75864 691 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 VAV2P52735 878 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 UBE3CQ15386 1083 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 IQCKQ8N0W5 287 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 MREGQ8N565 214 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 ZIM3Q96PE6 472 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 SHANK3Q9BYB0 1731 aa17.48■□□□□ 0.39
LRP8-202ENST00000347547 COL5A2P05997 1499 aaPredicted RBP17.48■□□□□ 0.39
LRP8-202ENST00000347547 HAUS3Q68CZ6 603 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 C3orf20Q8ND61 904 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
LRP8-202ENST00000347547 MTA3Q9BTC8 594 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 NUP58Q9BVL2 599 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
LRP8-202ENST00000347547 TCP1P17987 556 aaKnown RBP17.47■□□□□ 0.39
LRP8-202ENST00000347547 KIF5AQ12840 1032 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 RAPGEF4Q8WZA2 1011 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 CNNM2Q9H8M5 875 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 NHEJ1Q9H9Q4 299 aaPredicted RBP17.47■□□□□ 0.39
LRP8-202ENST00000347547 ZNHIT6Q9NWK9 470 aaKnown RBP17.47■□□□□ 0.39
LRP8-202ENST00000347547 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
LRP8-202ENST00000347547 CEP85LQ5SZL2 805 aa17.46■□□□□ 0.39
LRP8-202ENST00000347547 EP400NLQ6ZTU2 488 aa17.46■□□□□ 0.39
LRP8-202ENST00000347547 NLRP14Q86W24 1093 aa17.46■□□□□ 0.39
LRP8-202ENST00000347547 CEP120Q8N960 986 aa17.46■□□□□ 0.39
LRP8-202ENST00000347547 MYCBPAPQ8TBZ2 947 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms