RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 DNAJC18Q9H819 358 aa21.17■□□□□ 0.98
ATRIP-202ENST00000346691 STK32BQ9NY57 414 aa21.17■□□□□ 0.98
ATRIP-202ENST00000346691 MORC2Q9Y6X9 1032 aaPredicted RBP21.17■□□□□ 0.98
ATRIP-202ENST00000346691 SIPA1L1O43166 1804 aa21.17■□□□□ 0.98
ATRIP-202ENST00000346691 PLIN4Q96Q06 1357 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 GTF2F1P35269 517 aaKnown RBP eCLIP21.16■□□□□ 0.98
ATRIP-202ENST00000346691 SARSP49591 514 aaKnown RBP21.16■□□□□ 0.98
ATRIP-202ENST00000346691 HSP90AA4PQ58FG1 418 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 GPCPD1Q9NPB8 672 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 SMC2O95347 1197 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 TPM3P06753 285 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 NAPAP54920 295 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 ZDHHC15Q96MV8 337 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
ATRIP-202ENST00000346691 CCDC194A0A1B0GVG4 234 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 MPHOSPH10O00566 681 aaKnown RBP21.15■□□□□ 0.98
ATRIP-202ENST00000346691 C21orf2O43822 256 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 BMP15O95972 392 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 TRAPPC10P48553 1259 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 STRIP1Q5VSL9 837 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 SMARCE1Q969G3 411 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 LZTS2Q9BRK4 669 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 SPTLC3Q9NUV7 552 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 DDTLA6NHG4 134 aaPredicted RBP21.15■□□□□ 0.98
ATRIP-202ENST00000346691 ATP2B2Q01814 1243 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 FMR1Q06787 632 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATRIP-202ENST00000346691 PTPN21Q16825 1174 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 ELOA2Q8IYF1 753 aaPredicted RBP21.15■□□□□ 0.98
ATRIP-202ENST00000346691 PAGE5Q96GU1 130 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 FAM198AQ9UFP1 575 aa21.15■□□□□ 0.98
ATRIP-202ENST00000346691 NT5DC1Q5TFE4 455 aa21.14■□□□□ 0.98
ATRIP-202ENST00000346691 SH3BP5LQ7L8J4 393 aa21.14■□□□□ 0.98
ATRIP-202ENST00000346691 TRMT44Q8IYL2 757 aaKnown RBP21.14■□□□□ 0.98
ATRIP-202ENST00000346691 CCDC148Q8NFR7 591 aa21.14■□□□□ 0.98
ATRIP-202ENST00000346691 DPF2Q92785 391 aa21.14■□□□□ 0.98
ATRIP-202ENST00000346691 RRP36Q96EU6 259 aaKnown RBP21.14■□□□□ 0.98
ATRIP-202ENST00000346691 SMTNL1A8MU46 457 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 IKBKBO14920 756 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 MYL5Q02045 173 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 MORC3Q14149 939 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 DAGLBQ8NCG7 672 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 CNKSR1Q969H4 720 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 FANCLQ9NW38 375 aa21.14■□□□□ 0.97
ATRIP-202ENST00000346691 SMCO2A6NFE2 343 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 YDJCA8MPS7 323 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 SLFN14P0C7P3 912 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 TTBK2Q6IQ55 1244 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 MED15Q96RN5 788 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 HOOK1Q9UJC3 728 aaKnown RBP21.13■□□□□ 0.97
ATRIP-202ENST00000346691 PP2D1A8MPX8 630 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 FANCCQ00597 558 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 DEFB132Q7Z7B7 95 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 ZNF710Q8N1W2 664 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 TSC1Q92574 1164 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 COA7Q96BR5 231 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 ZMYND12Q9H0C1 365 aa21.13■□□□□ 0.97
ATRIP-202ENST00000346691 MYH4Q9Y623 1939 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 SH3RF1Q7Z6J0 888 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 TMEM260Q9NX78 707 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 TTLL1O95922 423 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 HLA-DOAP06340 250 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 E2F4Q16254 413 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 SPATA20Q8TB22 786 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 SEC63Q9UGP8 760 aaKnown RBP21.12■□□□□ 0.97
ATRIP-202ENST00000346691 SWAP70Q9UH65 585 aa21.12■□□□□ 0.97
ATRIP-202ENST00000346691 LRRC8AQ8IWT6 810 aa21.11■□□□□ 0.97
ATRIP-202ENST00000346691 SMYD4Q8IYR2 804 aaPredicted RBP21.11■□□□□ 0.97
ATRIP-202ENST00000346691 MTRQ99707 1265 aa21.11■□□□□ 0.97
ATRIP-202ENST00000346691 BLZF1Q9H2G9 400 aa21.11■□□□□ 0.97
ATRIP-202ENST00000346691 RIOX1Q9H6W3 641 aa21.11■□□□□ 0.97
ATRIP-202ENST00000346691 BIN2Q9UBW5 565 aaPredicted RBP21.11■□□□□ 0.97
ATRIP-202ENST00000346691 GREB1LQ9C091 1923 aaPredicted RBP21.11■□□□□ 0.97
ATRIP-202ENST00000346691 SLC16A2P36021 539 aa21.11■□□□□ 0.97
ATRIP-202ENST00000346691 ZSCAN29Q8IWY8 852 aaPredicted RBP21.11■□□□□ 0.97
ATRIP-202ENST00000346691 TDRD3Q9H7E2 651 aaKnown RBP21.11■□□□□ 0.97
ATRIP-202ENST00000346691 SNHG28P0DPA3 235 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 JAKMIP3Q5VZ66 844 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 KANK3Q6NY19 840 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 TMC6Q7Z403 805 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 TPM4P67936 248 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 DPYDQ12882 1025 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 KARSQ15046 597 aaKnown RBP21.1■□□□□ 0.97
ATRIP-202ENST00000346691 KCTD1Q719H9 257 aa21.1■□□□□ 0.97
ATRIP-202ENST00000346691 CD44P16070 742 aaKnown RBP21.09■□□□□ 0.97
ATRIP-202ENST00000346691 PDXDC2PQ6P474 469 aa21.09■□□□□ 0.97
ATRIP-202ENST00000346691 RAD21O60216 631 aa21.09■□□□□ 0.97
ATRIP-202ENST00000346691 PPP1R11O60927 126 aaPredicted RBP21.09■□□□□ 0.97
ATRIP-202ENST00000346691 ZNF543Q08ER8 600 aa21.09■□□□□ 0.97
ATRIP-202ENST00000346691 LETM2Q2VYF4 491 aa21.09■□□□□ 0.97
ATRIP-202ENST00000346691 GALNT17Q6IS24 598 aa21.09■□□□□ 0.97
ATRIP-202ENST00000346691 PLIN2Q99541 437 aa21.09■□□□□ 0.97
ATRIP-202ENST00000346691 TMEM232C9JQI7 657 aa21.08■□□□□ 0.97
ATRIP-202ENST00000346691 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
ATRIP-202ENST00000346691 JMJD4Q9H9V9 463 aa21.08■□□□□ 0.97
ATRIP-202ENST00000346691 C6orf50Q9HD87 102 aa21.08■□□□□ 0.97
ATRIP-202ENST00000346691 COBLO75128 1261 aa21.08■□□□□ 0.96
ATRIP-202ENST00000346691 ARL6IP4Q66PJ3 421 aaKnown RBP21.08■□□□□ 0.96
ATRIP-202ENST00000346691 ADGRF4Q8IZF3 695 aa21.08■□□□□ 0.96
ATRIP-202ENST00000346691 PRMT6Q96LA8 375 aaPredicted RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms