RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CEP57Q86XR8 500 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 PDLIM2Q96JY6 352 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 TIAM2Q8IVF5 1701 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 STIM1Q13586 685 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 SMC1AQ14683 1233 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 WTAPQ15007 396 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 PODNQ7Z5L7 613 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 ZNF277Q9NRM2 450 aaPredicted RBP11.78□□□□□ -0.52
CAPRIN1-201ENST00000341394 ECE2O60344 883 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 CCDC175P0C221 793 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 USP17L8P0C7I0 530 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 PDIA3P30101 505 aaKnown RBP11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 TCERG1LQ5VWI1 586 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 JDP2Q8WYK2 163 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 GOLGA1Q92805 767 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.52
CAPRIN1-201ENST00000341394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.523e-13■■■■□ 19.8
CAPRIN1-201ENST00000341394 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 RAD17O75943 681 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 ALX1Q15699 326 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 DALRD3Q5D0E6 543 aaKnown RBP11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 ANO1Q5XXA6 986 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 CLEC17AQ6ZS10 378 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 ATP8A2Q9NTI2 1148 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 TAB2Q9NYJ8 693 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 ANGEL1Q9UNK9 670 aaKnown RBP11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 IL1R1P14778 569 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 UBXN1Q04323 297 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 E2F4Q16254 413 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 KCNH3Q9ULD8 1083 aa11.77□□□□□ -0.53
CAPRIN1-201ENST00000341394 YEATS4O95619 227 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 USP40Q9NVE5 1235 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 QSER1Q2KHR3 1735 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 PFKFB1P16118 471 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 HPDP32754 393 aaPredicted RBP11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 UBA7P41226 1012 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 DCP1AQ9NPI6 582 aaPredicted RBP11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 PCDHAC2Q9Y5I4 1007 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 LAMB1P07942 1786 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 CTAGE9A4FU28 777 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 AP5Z1O43299 807 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 RAD51AP2Q09MP3 1159 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 OGFOD1Q8N543 542 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 RGS22Q8NE09 1264 aa11.76□□□□□ -0.53
CAPRIN1-201ENST00000341394 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 KMT5BQ4FZB7 885 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 C15orf52Q6ZUT6 534 aaKnown RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 IRX2Q9BZI1 471 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 USP17L3A6NCW0 530 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 USP17L4A6NCW7 530 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 USP17L1Q7RTZ2 530 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 NIM1KQ8IY84 436 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 TMEM87BQ96K49 555 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 RASSF4Q9H2L5 321 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 TLDC2A0PJX2 215 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 HNRNPH2P55795 449 aaKnown RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 TCP10Q12799 353 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 RTN1Q16799 776 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 ZNF287Q9HBT7 754 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 PDE11AQ9HCR9 933 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 ARPP21Q9UBL0 812 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 CTNND2Q9UQB3 1225 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 NMT2O60551 498 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 KRT40Q6A162 431 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 TXLNBQ8N3L3 684 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 IGDCC4Q8TDY8 1250 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.75□□□□□ -0.537e-8■■■■■ 136.4
CAPRIN1-201ENST00000341394 TMOD2Q9NZR1 351 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
CAPRIN1-201ENST00000341394 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 TSPY3P0CV98 308 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 TSPY8P0CW00 308 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 CLCN6P51797 869 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms