RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ORC4O43929 436 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 NECAB2Q7Z6G3 386 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 DPP9Q86TI2 863 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 MAML3Q96JK9 1138 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 HTATIP2Q9BUP3 242 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 IL25Q9H293 177 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 ZMYM6O95789 1325 aa20.26■□□□□ 0.83
BRCC3-202ENST00000340647 LCTP09848 1927 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 SLC25A27O95847 323 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 PGK2P07205 417 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 ZNF792Q3KQV3 632 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 PRAMEF19Q5SWL8 479 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 MFSD14CQ5VZR4 134 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 SLFN13Q68D06 897 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 PRPF38AQ8NAV1 312 aaKnown RBP20.25■□□□□ 0.83
BRCC3-202ENST00000340647 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
BRCC3-202ENST00000340647 ATP2A1O14983 1001 aa20.24■□□□□ 0.83
BRCC3-202ENST00000340647 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
BRCC3-202ENST00000340647 DDX20Q9UHI6 824 aaKnown RBP20.24■□□□□ 0.83
BRCC3-202ENST00000340647 SLC3A2P08195 630 aaKnown RBP20.23■□□□□ 0.83
BRCC3-202ENST00000340647 FCER1AP12319 257 aa20.23■□□□□ 0.83
BRCC3-202ENST00000340647 TBC1D10CQ8IV04 446 aa20.23■□□□□ 0.83
BRCC3-202ENST00000340647 CHMP4CQ96CF2 233 aa20.23■□□□□ 0.83
BRCC3-202ENST00000340647 C11orf49Q9H6J7 331 aa20.23■□□□□ 0.83
BRCC3-202ENST00000340647 ZNF536O15090 1300 aa20.23■□□□□ 0.83
BRCC3-202ENST00000340647 DNAJC25-GNG10A0A024R161 153 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 BMP3P12645 472 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
BRCC3-202ENST00000340647 HAND2P61296 217 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.83
BRCC3-202ENST00000340647 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 GMCL1Q96IK5 515 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 FGD4Q96M96 766 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 MMP19Q99542 508 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
BRCC3-202ENST00000340647 FEM1BQ9UK73 627 aa20.22■□□□□ 0.83
BRCC3-202ENST00000340647 TSPY2A6NKD2 308 aa20.21■□□□□ 0.83
BRCC3-202ENST00000340647 RANBP6O60518 1105 aaKnown RBP20.21■□□□□ 0.83
BRCC3-202ENST00000340647 TAL1P17542 331 aaPredicted RBP20.21■□□□□ 0.83
BRCC3-202ENST00000340647 MCCP23508 829 aa20.21■□□□□ 0.83
BRCC3-202ENST00000340647 ANO1Q5XXA6 986 aa20.21■□□□□ 0.83
BRCC3-202ENST00000340647 SNRNP48Q6IEG0 339 aaKnown RBP20.21■□□□□ 0.83
BRCC3-202ENST00000340647 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
BRCC3-202ENST00000340647 TEX13BQ9BXU2 312 aa20.21■□□□□ 0.83
BRCC3-202ENST00000340647 TMEM232C9JQI7 657 aa20.2■□□□□ 0.82
BRCC3-202ENST00000340647 EVI5O60447 810 aa20.2■□□□□ 0.82
BRCC3-202ENST00000340647 CWC27Q6UX04 472 aaKnown RBP20.2■□□□□ 0.82
BRCC3-202ENST00000340647 CPXCR1Q8N123 301 aa20.2■□□□□ 0.82
BRCC3-202ENST00000340647 STX8Q9UNK0 236 aa20.2■□□□□ 0.82
BRCC3-202ENST00000340647 DIS3Q9Y2L1 958 aaKnown RBP20.2■□□□□ 0.82
BRCC3-202ENST00000340647 CNGA1P29973 690 aa20.19■□□□□ 0.82
BRCC3-202ENST00000340647 LRRC26Q2I0M4 334 aa20.19■□□□□ 0.82
BRCC3-202ENST00000340647 KCTD1Q719H9 257 aa20.19■□□□□ 0.82
BRCC3-202ENST00000340647 TCP11L1Q9NUJ3 509 aa20.19■□□□□ 0.82
BRCC3-202ENST00000340647 NR2E3Q9Y5X4 410 aa20.19■□□□□ 0.82
BRCC3-202ENST00000340647 A0A0C4DFX4 3053 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 SEPT4O43236 478 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 PLA2G6O60733 806 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 ZNF865P0CJ78 1059 aaPredicted RBP20.18■□□□□ 0.82
BRCC3-202ENST00000340647 SNAP25P60880 206 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 AKNAD1Q5T1N1 836 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 STAG1Q8WVM7 1258 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 TMEM47Q9BQJ4 181 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 TINF2Q9BSI4 451 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 NEDD4P46934 1319 aa20.18■□□□□ 0.82
BRCC3-202ENST00000340647 SOX1O00570 391 aaPredicted RBP20.17■□□□□ 0.82
BRCC3-202ENST00000340647 ZBED4O75132 1171 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 SNAI1O95863 264 aaPredicted RBP20.17■□□□□ 0.82
BRCC3-202ENST00000340647 COPB2P35606 906 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 SLC1A4P43007 532 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 KCTD2Q14681 263 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 RRP12Q5JTH9 1297 aaKnown RBP20.17■□□□□ 0.82
BRCC3-202ENST00000340647 TTBK2Q6IQ55 1244 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 C7orf61Q8IZ16 206 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 AGBL1Q96MI9 1066 aa20.17■□□□□ 0.82
BRCC3-202ENST00000340647 MSCO60682 206 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 STAT2P52630 851 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 OAZ1P54368 228 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 GJC2Q5T442 439 aaPredicted RBP20.16■□□□□ 0.82
BRCC3-202ENST00000340647 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 MAMDC4Q6UXC1 1216 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 SLC5A4Q9NY91 659 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 PRR12Q9ULL5 1215 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 LRRC37A2A6NM11 1700 aa20.16■□□□□ 0.82
BRCC3-202ENST00000340647 SLC4A3P48751 1232 aa20.15■□□□□ 0.82
BRCC3-202ENST00000340647 GDF15Q99988 308 aa20.15■□□□□ 0.82
BRCC3-202ENST00000340647 ZMYND8Q9ULU4 1186 aaPredicted RBP20.15■□□□□ 0.82
BRCC3-202ENST00000340647 ASTN1O14525 1302 aa20.15■□□□□ 0.82
BRCC3-202ENST00000340647 LTBP2Q14767 1821 aa20.15■□□□□ 0.82
BRCC3-202ENST00000340647 DNM1LO00429 736 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 ADCY6O43306 1168 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 SYN1P17600 705 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 BTNL9Q6UXG8 535 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 FAM160B2Q86V87 743 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 CHURC1Q8WUH1 139 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
BRCC3-202ENST00000340647 SENP6Q9GZR1 1112 aaPredicted RBP20.14■□□□□ 0.81
BRCC3-202ENST00000340647 MTMR7Q9Y216 660 aa20.14■□□□□ 0.81
BRCC3-202ENST00000340647 TOP1P11387 765 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms