RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LONRF3Q496Y0 759 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 C12orf60Q5U649 245 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 FOXP1Q9H334 677 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-201ENST00000338910 PDE11AQ9HCR9 933 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 RAB21Q9UL25 225 aa21.24■□□□□ 0.99
PSPC1-201ENST00000338910 NOP2P46087 812 aaKnown RBP21.23■□□□□ 0.99
PSPC1-201ENST00000338910 MFSD14BQ5SR56 506 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 SHISA4Q96DD7 197 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 CALM1P0DP23 149 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 CALM2P0DP24 149 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 CALM3P0DP25 149 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 TFAP4Q01664 338 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 HSP90AA4PQ58FG1 418 aa21.23■□□□□ 0.99
PSPC1-201ENST00000338910 IRX2Q9BZI1 471 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-201ENST00000338910 LRRC37AA6NMS7 1700 aa21.22■□□□□ 0.99
PSPC1-201ENST00000338910 LDHCP07864 332 aa21.22■□□□□ 0.99
PSPC1-201ENST00000338910 ALDH1B1P30837 517 aa21.22■□□□□ 0.99
PSPC1-201ENST00000338910 MAPKAPK5Q8IW41 473 aa21.22■□□□□ 0.99
PSPC1-201ENST00000338910 ZSWIM4Q9H7M6 989 aa21.22■□□□□ 0.99
PSPC1-201ENST00000338910 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.22■□□□□ 0.99
PSPC1-201ENST00000338910 RBM28Q9NW13 759 aaKnown RBP21.22■□□□□ 0.99
PSPC1-201ENST00000338910 VPS18Q9P253 973 aa21.22■□□□□ 0.99
PSPC1-201ENST00000338910 PRPF3O43395 683 aaKnown RBP21.21■□□□□ 0.99
PSPC1-201ENST00000338910 IVLP07476 585 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 HDXQ7Z353 690 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 MSANTD4Q8NCY6 345 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 SAP30BPQ9UHR5 308 aaKnown RBP21.21■□□□□ 0.99
PSPC1-201ENST00000338910 LTBP1Q14766 1721 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 RPS6KA5O75582 802 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 DDAH1O94760 285 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 MCM6Q14566 821 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 LEKR1Q6ZMV7 388 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 CNNM3Q8NE01 707 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 CTCFLQ8NI51 663 aaPredicted RBP21.21■□□□□ 0.99
PSPC1-201ENST00000338910 ZNF622Q969S3 477 aaKnown RBP eCLIP21.21■□□□□ 0.992e-7■■■□□ 15.9
PSPC1-201ENST00000338910 MASTLQ96GX5 879 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 MKNK2Q9HBH9 465 aa21.21■□□□□ 0.99
PSPC1-201ENST00000338910 CCDC175P0C221 793 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 PPP4CP60510 307 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 MTF1Q14872 753 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 SPECC1Q5M775 1068 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 RCSD1Q6JBY9 416 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 SRBD1Q8N5C6 995 aaKnown RBP21.2■□□□□ 0.99
PSPC1-201ENST00000338910 RTFDC1Q9BY42 306 aaPredicted RBP21.2■□□□□ 0.99
PSPC1-201ENST00000338910 KCNH3Q9ULD8 1083 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 L1RE1Q9UN81 338 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 NFE2L3Q9Y4A8 694 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 PCDHB6Q9Y5E3 794 aa21.2■□□□□ 0.99
PSPC1-201ENST00000338910 POTEB2H3BUK9 544 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 XBP1P17861 261 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 BTDP43251 543 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 PLCD1P51178 756 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 GTF2IP78347 998 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 MDM2Q00987 491 aaPredicted RBP21.2■□□□□ 0.98
PSPC1-201ENST00000338910 RILPL1Q5EBL4 403 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 TMTC3Q6ZXV5 915 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 ELOA2Q8IYF1 753 aaPredicted RBP21.2■□□□□ 0.98
PSPC1-201ENST00000338910 PNKPQ96T60 521 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 CDC23Q9UJX2 597 aa21.2■□□□□ 0.98
PSPC1-201ENST00000338910 FMR1Q06787 632 aaKnown RBP eCLIP21.19■□□□□ 0.98
PSPC1-201ENST00000338910 SLC15A2Q16348 729 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 SLC44A5Q8NCS7 719 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 IL17RBQ9NRM6 502 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 KIAA1551Q9HCM1 1747 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 FOXN1O15353 648 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 DPP8Q6V1X1 898 aaPredicted RBP21.19■□□□□ 0.98
PSPC1-201ENST00000338910 CEP112Q8N8E3 955 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 CAMKK2Q96RR4 588 aa21.19■□□□□ 0.98
PSPC1-201ENST00000338910 ZC3H12CQ9C0D7 883 aaKnown RBP21.19■□□□□ 0.98
PSPC1-201ENST00000338910 FAM205CA6NFA0 338 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 COL11A2P13942 1736 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-201ENST00000338910 AMOTL1Q8IY63 956 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 KRI1Q8N9T8 703 aaKnown RBP21.18■□□□□ 0.98
PSPC1-201ENST00000338910 ENOX1Q8TC92 643 aaKnown RBP21.18■□□□□ 0.98
PSPC1-201ENST00000338910 PUF60Q9UHX1 559 aaKnown RBP21.18■□□□□ 0.98
PSPC1-201ENST00000338910 USP17L3A6NCW0 530 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 USP17L4A6NCW7 530 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 USP17L1Q7RTZ2 530 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 TBC1D22AQ8WUA7 517 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 PANX2Q96RD6 677 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 PHF20Q9BVI0 1012 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 MAN1B1Q9UKM7 699 aa21.18■□□□□ 0.98
PSPC1-201ENST00000338910 SOWAHDA6NJG2 315 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 N4BP1O75113 896 aaKnown RBP21.17■□□□□ 0.98
PSPC1-201ENST00000338910 EIF3JO75822 258 aaKnown RBP21.17■□□□□ 0.98
PSPC1-201ENST00000338910 GRIN1Q05586 938 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 NR1I3Q14994 352 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 EARS2Q5JPH6 523 aaKnown RBP21.17■□□□□ 0.98
PSPC1-201ENST00000338910 COA1Q9GZY4 146 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 KAT14Q9H8E8 782 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 ADGRG1Q9Y653 693 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 BAZ2BQ9UIF8 2168 aaKnown RBP21.17■□□□□ 0.98
PSPC1-201ENST00000338910 ERLIN1O75477 346 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 DOK7Q18PE1 504 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 C2CD5Q86YS7 1000 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 ABCB6Q9NP58 842 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 LZTFL1Q9NQ48 299 aa21.17■□□□□ 0.98
PSPC1-201ENST00000338910 LAMB1P07942 1786 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 FAM205AQ6ZU69 1335 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms