RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 KIF5BP33176 963 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 DTHD1Q6ZMT9 781 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 GOLGA5Q8TBA6 731 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 CAPZA3Q96KX2 299 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 AKAP11Q9UKA4 1901 aa18.55■□□□□ 0.56
CDC42EP4-201ENST00000335793 GPIHBP1Q8IV16 184 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 SPATA20Q8TB22 786 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 PDE11AQ9HCR9 933 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 RMND1Q9NWS8 449 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 LUC7L2Q9Y383 392 aaKnown RBP18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 XDHP47989 1333 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 PP2D1A8MPX8 630 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 CHP1Q99653 195 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 MTA3Q9BTC8 594 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 GTPBP6O43824 516 aaPredicted RBP18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 PRDX5P30044 214 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 RCAN1P53805 252 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 ATP2C1P98194 919 aaPredicted RBP18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 TFAP4Q01664 338 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 RSRC2Q7L4I2 434 aaKnown RBP18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 ABHD10Q9NUJ1 306 aa18.54■□□□□ 0.56
CDC42EP4-201ENST00000335793 NUP188Q5SRE5 1749 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 CCDC151A5D8V7 595 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 GLI3P10071 1580 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 TRIM21P19474 475 aaKnown RBP18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 PRCPP42785 496 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 NCAPH2Q6IBW4 605 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 RNF217Q8TC41 542 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 MECOMQ03112 1051 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 TCP11X2Q5H9J9 407 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 FAM84BQ96KN1 310 aaPredicted RBP18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 TFR2Q9UP52 801 aa18.53■□□□□ 0.56
CDC42EP4-201ENST00000335793 BCL9O00512 1426 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 EIF3JO75822 258 aaKnown RBP18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 CDKAL1Q5VV42 579 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 EGFL6Q8IUX8 553 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 BLIDQ8IZY5 108 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 ZNHIT6Q9NWK9 470 aaKnown RBP18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 TRIM10Q9UDY6 481 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 EPN1Q9Y6I3 576 aaPredicted RBP18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 ATP8B1O43520 1251 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 DDAH1O94760 285 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 NTSR2O95665 410 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 BRD3Q15059 726 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 INF2Q27J81 1249 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 CCDC122Q5T0U0 273 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 RASGRP2Q7LDG7 609 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 HINFPQ9BQA5 517 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 FUT8Q9BYC5 575 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 MINPP1Q9UNW1 487 aa18.52■□□□□ 0.56
CDC42EP4-201ENST00000335793 RNF225M0QZC1 329 aaPredicted RBP18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 USP17L8P0C7I0 530 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 KLRK1P26718 216 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 CALML3P27482 149 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 MAGEA9P43362 315 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 ERVK-24P63145 666 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 UBE4AQ14139 1066 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 C3orf67Q6ZVT6 689 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 CCDC148Q8NFR7 591 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 GDAP1L1Q96MZ0 367 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 ABCB6Q9NP58 842 aa18.52■□□□□ 0.55
CDC42EP4-201ENST00000335793 ERCC3P19447 782 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 ACTN2P35609 894 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 APTXQ7Z2E3 356 aaKnown RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 HDXQ7Z353 690 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 CCDC51Q96ER9 411 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 BRIP1Q9BX63 1249 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 DCP1AQ9NPI6 582 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 RWDD2AQ9UIY3 292 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 MYH7P12883 1935 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 PARP1P09874 1014 aaKnown RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 FUT2Q10981 343 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 ITPK1Q13572 414 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 ZNF658Q5TYW1 1059 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 AMOTL1Q8IY63 956 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 CCDC47Q96A33 483 aaKnown RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 PYM1Q9BRP8 204 aaKnown RBP18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 C4BP0C0L5 1744 aa18.51■□□□□ 0.55
CDC42EP4-201ENST00000335793 PSMA7O14818 248 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 ZNF444Q8N0Y2 327 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 DYNLL2Q96FJ2 89 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 PNKPQ96T60 521 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 RABEP2Q9H5N1 569 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 ANAPC4Q9UJX5 808 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 CNTNAP5Q8WYK1 1306 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 POTEB2H3BUK9 544 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 ADAMTS3O15072 1205 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 MTIF2P46199 727 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms