RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 GTF2A2P52657 109 aa10.96□□□□□ -0.65
C11orf54-201ENST00000331239 SNAPC2Q13487 334 aa10.96□□□□□ -0.65
C11orf54-201ENST00000331239 MCTP2Q6DN12 878 aa10.96□□□□□ -0.65
C11orf54-201ENST00000331239 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
C11orf54-201ENST00000331239 CCDC12Q8WUD4 166 aaPredicted RBP10.96□□□□□ -0.65
C11orf54-201ENST00000331239 CCDC102AQ96A19 550 aa10.96□□□□□ -0.65
C11orf54-201ENST00000331239 TMEM63CQ9P1W3 806 aa10.96□□□□□ -0.65
C11orf54-201ENST00000331239 CDC27P30260 824 aa10.96□□□□□ -0.66
C11orf54-201ENST00000331239 ST3GAL1Q11201 340 aa10.96□□□□□ -0.66
C11orf54-201ENST00000331239 SPP2Q13103 211 aa10.96□□□□□ -0.66
C11orf54-201ENST00000331239 ACER1Q8TDN7 264 aa10.96□□□□□ -0.66
C11orf54-201ENST00000331239 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.66
C11orf54-201ENST00000331239 TLL2Q9Y6L7 1015 aa10.96□□□□□ -0.66
C11orf54-201ENST00000331239 PTPDC1A2A3K4 754 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 TRAF5O00463 557 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 CETPP11597 493 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 ADD1P35611 737 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 OAZ1P54368 228 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 ATP2B2Q01814 1243 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 CST9Q5W186 159 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 LRSAM1Q6UWE0 723 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 LBX2Q6XYB7 198 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 RRP36Q96EU6 259 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 HOXC10Q9NYD6 342 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 PNMA6FA0A0J9YX94 578 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 TMEM88BA6NKF7 163 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 STAT2P52630 851 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 CCT2P78371 535 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 PFKFB3Q16875 520 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 SRBD1Q8N5C6 995 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 MB21D1Q8N884 522 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 NECAB1Q8N987 351 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 PRPF38AQ8NAV1 312 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 FAM184AQ8NB25 1140 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 ZNF784Q8NCA9 323 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 WNK4Q96J92 1243 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 RBSNQ9H1K0 784 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
C11orf54-201ENST00000331239 CNTNAP5Q8WYK1 1306 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 PARP14Q460N5 1801 aa10.95□□□□□ -0.66
C11orf54-201ENST00000331239 SYCE3A1L190 88 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 IRF6O14896 467 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 SLURP2P0DP57 97 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 STK3Q13188 491 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 SYDE2Q5VT97 1194 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
C11orf54-201ENST00000331239 ADAMTS5Q9UNA0 930 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 ESYT2A0FGR8 921 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 UBE2Q2LH0YL09 131 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 ATP2A1O14983 1001 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 CALML3P27482 149 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 GJB2P29033 226 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 COPB2P35606 906 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 ECE1P42892 770 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 MTMR2Q13614 643 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 CCDC96Q2M329 555 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 CATSPERGQ6ZRH7 1159 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 CCDC148Q8NFR7 591 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 SYAP1Q96A49 352 aaPredicted RBP10.94□□□□□ -0.66
C11orf54-201ENST00000331239 OPTNQ96CV9 577 aa10.94□□□□□ -0.66
C11orf54-201ENST00000331239 MAP3K20Q9NYL2 800 aaKnown RBP10.94□□□□□ -0.66
C11orf54-201ENST00000331239 MANSC4A6NHS7 340 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-201ENST00000331239 ZBTB5O15062 677 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 SCG2P13521 617 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 VCAM1P19320 739 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 TKFCQ3LXA3 575 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 SAPCD2Q86UD0 394 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 MYL10Q9BUA6 226 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 RANBP17Q9H2T7 1088 aaKnown RBP10.93□□□□□ -0.66
C11orf54-201ENST00000331239 ELP3Q9H9T3 547 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 NCOA5Q9HCD5 579 aaKnown RBP10.93□□□□□ -0.66
C11orf54-201ENST00000331239 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 TRIM29Q14134 588 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 COG2Q14746 738 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 SHROOM1Q2M3G4 852 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-201ENST00000331239 RGMBQ6NW40 437 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 PPP1R9AQ9ULJ8 1098 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 AGTPBP1Q9UPW5 1226 aa10.93□□□□□ -0.66
C11orf54-201ENST00000331239 RLFQ13129 1914 aa10.92□□□□□ -0.66
C11orf54-201ENST00000331239 TMEM232C9JQI7 657 aa10.92□□□□□ -0.66
C11orf54-201ENST00000331239 FDPSP14324 419 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms