RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 NCAPHQ15003 741 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 FANCLQ9NW38 375 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 MAST2Q6P0Q8 1798 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 FAM237AA0A1B0GTK4 181 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 SERPINC1P01008 464 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 KARSQ15046 597 aaKnown RBP18.13■□□□□ 0.49
SHISA2-201ENST00000319420 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 ANKS1AQ92625 1134 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 MRFAP1L1Q96HT8 127 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 MAPK8IP1Q9UQF2 711 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 ACTN4O43707 911 aaKnown RBP18.13■□□□□ 0.49
SHISA2-201ENST00000319420 CCNT1O60563 726 aaKnown RBP18.13■□□□□ 0.49
SHISA2-201ENST00000319420 GABPAQ06546 454 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 PRMT6Q96LA8 375 aaPredicted RBP18.13■□□□□ 0.49
SHISA2-201ENST00000319420 DNAJC18Q9H819 358 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 TUBE1Q9UJT0 475 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 PRDM4Q9UKN5 801 aa18.13■□□□□ 0.49
SHISA2-201ENST00000319420 LAMB1P07942 1786 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 ADAMTSL1Q8N6G6 1762 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 NAV1Q8NEY1 1877 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 DHX8Q14562 1220 aaKnown RBP18.12■□□□□ 0.49
SHISA2-201ENST00000319420 STRIP1Q5VSL9 837 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 HOOK1Q9UJC3 728 aaKnown RBP18.12■□□□□ 0.49
SHISA2-201ENST00000319420 CDC25BP30305 580 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 ATP2C1P98194 919 aaPredicted RBP18.12■□□□□ 0.49
SHISA2-201ENST00000319420 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 TMC6Q7Z403 805 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 TSC1Q92574 1164 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
SHISA2-201ENST00000319420 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
SHISA2-201ENST00000319420 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
SHISA2-201ENST00000319420 COL11A2P13942 1736 aaPredicted RBP18.11■□□□□ 0.49
SHISA2-201ENST00000319420 TTLL1O95922 423 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 TAL1P17542 331 aaPredicted RBP18.11■□□□□ 0.49
SHISA2-201ENST00000319420 HMGB2P26583 209 aaKnown RBP18.11■□□□□ 0.49
SHISA2-201ENST00000319420 MDM2Q00987 491 aaPredicted RBP18.11■□□□□ 0.49
SHISA2-201ENST00000319420 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHISA2-201ENST00000319420 GOLGA8FQ08AF8 430 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 GOLGA8DPQ0D2H9 430 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
SHISA2-201ENST00000319420 HHIPL2Q6UWX4 724 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 LARGE2Q8N3Y3 721 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 HSD3B7Q9H2F3 369 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 CFAP100Q494V2 611 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 SH3BP5LQ7L8J4 393 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 SPICE1Q8N0Z3 855 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 CCDC148Q8NFR7 591 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 DPF2Q92785 391 aa18.11■□□□□ 0.49
SHISA2-201ENST00000319420 SEPT2Q15019 361 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 UBE2SQ16763 222 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 DDX60LQ5H9U9 1706 aaKnown RBP18.1■□□□□ 0.49
SHISA2-201ENST00000319420 DPEP1P16444 411 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 CDK11BP21127 795 aaKnown RBP18.1■□□□□ 0.49
SHISA2-201ENST00000319420 TPM4P67936 248 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
SHISA2-201ENST00000319420 GJA10Q969M2 543 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 PAGE5Q96GU1 130 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 VEZTQ9HBM0 779 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.1■□□□□ 0.49
SHISA2-201ENST00000319420 SUGT1Q9Y2Z0 365 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 MYH1P12882 1939 aa18.1■□□□□ 0.49
SHISA2-201ENST00000319420 TERF1P54274 439 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 MYL5Q02045 173 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 ZNF579Q8NAF0 562 aaKnown RBP18.09■□□□□ 0.49
SHISA2-201ENST00000319420 FERMT2Q96AC1 680 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 FANCCQ00597 558 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 BPIFA3Q9BQP9 254 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 EEF2P13639 858 aaKnown RBP18.09■□□□□ 0.49
SHISA2-201ENST00000319420 TNNI2P48788 182 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 ADGRF4Q8IZF3 695 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 TTLL6Q8N841 843 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 TBCKQ8TEA7 893 aa18.09■□□□□ 0.49
SHISA2-201ENST00000319420 TRMT1Q9NXH9 659 aaKnown RBP18.09■□□□□ 0.49
SHISA2-201ENST00000319420 SMTNL1A8MU46 457 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 C7orf43Q8WVR3 580 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 C16orf45Q96MC5 204 aaPredicted RBP18.08■□□□□ 0.48
SHISA2-201ENST00000319420 SPZ1Q9BXG8 430 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 C6orf50Q9HD87 102 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 NFE2L3Q9Y4A8 694 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 UBASH3AP57075 661 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 CDAN1Q8IWY9 1227 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 EEF2KMTQ96G04 330 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 CSRNP1Q96S65 589 aa18.08■□□□□ 0.48
SHISA2-201ENST00000319420 TMEM232C9JQI7 657 aa18.07■□□□□ 0.48
SHISA2-201ENST00000319420 SLFN14P0C7P3 912 aa18.07■□□□□ 0.48
SHISA2-201ENST00000319420 CUL4BQ13620 913 aa18.07■□□□□ 0.48
SHISA2-201ENST00000319420 ZYXQ15942 572 aaKnown RBP18.07■□□□□ 0.48
SHISA2-201ENST00000319420 REXO1Q8N1G1 1221 aaKnown RBP18.07■□□□□ 0.48
SHISA2-201ENST00000319420 SAMSN1Q9NSI8 373 aaKnown RBP18.07■□□□□ 0.48
SHISA2-201ENST00000319420 SCN9AQ15858 1988 aa18.07■□□□□ 0.48
SHISA2-201ENST00000319420 USP27XA6NNY8 438 aa18.07■□□□□ 0.48
SHISA2-201ENST00000319420 TECP42680 631 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms