RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 POLR2AP24928 1970 aaKnown RBP16.19■□□□□ 0.18
VRK3-201ENST00000316763 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
VRK3-201ENST00000316763 CLRN2A0PK11 232 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 UBE2Q2LH0YL09 131 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 MYO1BO43795 1136 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 TSPY3P0CV98 308 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 TSPY8P0CW00 308 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 SKILP12757 684 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
VRK3-201ENST00000316763 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
VRK3-201ENST00000316763 SWAP70Q9UH65 585 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 COL2A1P02458 1487 aaPredicted RBP16.19■□□□□ 0.18
VRK3-201ENST00000316763 ATRNL1Q5VV63 1379 aa16.18■□□□□ 0.18
VRK3-201ENST00000316763 NRDCO43847 1150 aa16.18■□□□□ 0.18
VRK3-201ENST00000316763 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
VRK3-201ENST00000316763 TROAPQ12815 778 aa16.18■□□□□ 0.18
VRK3-201ENST00000316763 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
VRK3-201ENST00000316763 ZNF579Q8NAF0 562 aaKnown RBP16.18■□□□□ 0.18
VRK3-201ENST00000316763 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
VRK3-201ENST00000316763 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 CBFA2T2O43439 604 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 DDAH1O94760 285 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 TNNT1P13805 278 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 PTPREP23469 700 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 TOB1P50616 345 aaPredicted RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 TCP10Q12799 353 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 CCDC150Q8NCX0 1101 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 C16orf45Q96MC5 204 aaPredicted RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 XPO4Q9C0E2 1151 aaKnown RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 IFNKQ9P0W0 207 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 PLIN4Q96Q06 1357 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 NOVP48745 357 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 MYL5Q02045 173 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 PNOCQ13519 176 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 LONRF3Q496Y0 759 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 USP50Q70EL3 339 aaPredicted RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
VRK3-201ENST00000316763 PI4KBQ9UBF8 816 aa16.17■□□□□ 0.18
VRK3-201ENST00000316763 RIOK3O14730 519 aaKnown RBP16.16■□□□□ 0.18
VRK3-201ENST00000316763 SHMT1P34896 483 aa16.16■□□□□ 0.18
VRK3-201ENST00000316763 NCAPHQ15003 741 aa16.16■□□□□ 0.18
VRK3-201ENST00000316763 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
VRK3-201ENST00000316763 CMTR1Q8N1G2 835 aaKnown RBP16.16■□□□□ 0.18
VRK3-201ENST00000316763 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
VRK3-201ENST00000316763 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
VRK3-201ENST00000316763 TMOD2Q9NZR1 351 aa16.16■□□□□ 0.18
VRK3-201ENST00000316763 FBXO2Q9UK22 296 aaPredicted RBP16.16■□□□□ 0.18
VRK3-201ENST00000316763 SRPRBQ9Y5M8 271 aaKnown RBP16.16■□□□□ 0.18
VRK3-201ENST00000316763 MORC2Q9Y6X9 1032 aaPredicted RBP16.16■□□□□ 0.18
VRK3-201ENST00000316763 KRT2P35908 639 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 FANCCQ00597 558 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 VEZTQ9HBM0 779 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 SCAF8Q9UPN6 1271 aaKnown RBP16.15■□□□□ 0.18
VRK3-201ENST00000316763 TCP10L2B9ZVM9 353 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 BMP15O95972 392 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 CCZ1BP86790 482 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 CCZ1P86791 482 aaPredicted RBP16.15■□□□□ 0.18
VRK3-201ENST00000316763 NR5A1Q13285 461 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 ARID5BQ14865 1188 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
VRK3-201ENST00000316763 TMC6Q7Z403 805 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
VRK3-201ENST00000316763 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 KCND1Q9NSA2 647 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 DACH1Q9UI36 760 aa16.15■□□□□ 0.18
VRK3-201ENST00000316763 IGKV6D-41A0A0C4DH26 115 aa16.14■□□□□ 0.17
VRK3-201ENST00000316763 TRIM75PA6NK02 468 aa16.14■□□□□ 0.17
VRK3-201ENST00000316763 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
VRK3-201ENST00000316763 PNMA8AQ86V59 439 aaPredicted RBP16.14■□□□□ 0.17
VRK3-201ENST00000316763 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
VRK3-201ENST00000316763 PCDHA5Q9Y5H7 936 aa16.14■□□□□ 0.17
VRK3-201ENST00000316763 CNTNAP1P78357 1384 aa16.14■□□□□ 0.17
VRK3-201ENST00000316763 SFPQP23246 707 aaKnown RBP eCLIP16.13■□□□□ 0.17
VRK3-201ENST00000316763 POSTNQ15063 836 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 PHF20Q9BVI0 1012 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 SIPA1L1O43166 1804 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 KIF2AO00139 706 aaPredicted RBP16.13■□□□□ 0.17
VRK3-201ENST00000316763 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
VRK3-201ENST00000316763 SERPINC1P01008 464 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 AKR1B1P15121 316 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
VRK3-201ENST00000316763 FUT2Q10981 343 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms