RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 E7EVH7 732 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 DPEP1P16444 411 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 TRIM68Q6AZZ1 485 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 KCNB2Q92953 911 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 SNAP23O00161 211 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 PTGER2P43116 358 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 B4GALNT2Q8NHY0 566 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 BRF1Q92994 677 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 SPAG5Q96R06 1193 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 SGIP1Q9BQI5 828 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 XDHP47989 1333 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 TGFB2P61812 414 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 DPCR1Q3MIW9 517 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 SLC40A1Q9NP59 571 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 TCHHQ07283 1943 aa13.06□□□□□ -0.32
LDLRAD3-201ENST00000315571 HSF2BPO75031 334 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 PSMA5P28066 241 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 ADORA1P30542 326 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 KIF5BP33176 963 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 ME3Q16798 604 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 TRIM65Q6PJ69 517 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 TCP11Q8WWU5 503 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 FANCLQ9NW38 375 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 HPDP32754 393 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 ABCD1P33897 745 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 RSRC2Q7L4I2 434 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 SP8Q8IXZ3 490 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 GSPT2Q8IYD1 628 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 PGBD1Q96JS3 809 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 AOX1Q06278 1338 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 SALL3Q9BXA9 1300 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 MXRA7P84157 204 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 OSBPL3Q9H4L5 887 aa13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
LDLRAD3-201ENST00000315571 COL4A1P02462 1669 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 UFL1O94874 794 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 HIBCHQ6NVY1 386 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 ACRBPQ8NEB7 543 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 WWC3Q9ULE0 1092 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 ZNF804BA4D1E1 1349 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 SOCS7O14512 581 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 TUBB4BP68371 445 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 GPSM2P81274 684 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 SYNE3Q6ZMZ3 975 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 SEC62Q99442 399 aaKnown RBP13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 FGFR2P21802 821 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 TPP2P29144 1249 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 PRPHP41219 470 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 POLE2P56282 527 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 CAVIN4Q5BKX8 364 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
LDLRAD3-201ENST00000315571 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 TAF1P21675 1872 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 USP5P45974 858 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 SLC51AQ86UW1 340 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 NAPGQ99747 312 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 A1CFQ9NQ94 594 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 MYO1BO43795 1136 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 SPATS2Q86XZ4 545 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 HNRNPLLQ8WVV9 542 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-201ENST00000315571 CDKL5O76039 1030 aa13.02□□□□□ -0.32
LDLRAD3-201ENST00000315571 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.32
LDLRAD3-201ENST00000315571 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms